6RY9
Winter flounder 1a-1 in SDS micelles
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D TOCSY | 0.5 mM NA WF 1a-1, 50 mM U-98% 2H deuterated sodium dodecyl sulphate (d-25) SDS, 0.05 w/w NA TSP | 90% H2O/10% D2O | 0.5 WF1a-1 mM | 7.0 | 1 atm | 298 | Bruker AVANCE 600 |
2 | 2D NOESY | 0.5 mM NA WF 1a-1, 50 mM U-98% 2H deuterated sodium dodecyl sulphate (d-25) SDS, 0.05 w/w NA TSP | 90% H2O/10% D2O | 0.5 WF1a-1 mM | 7.0 | 1 atm | 298 | Bruker AVANCE 600 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 600 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
simulated annealing | DYNAMO |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 1000 |
Conformers Submitted Total Number | 100 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | processing | TopSpin | Bruker Biospin | |
2 | chemical shift assignment | CARA | Keller and Wuthrich | |
3 | peak picking | NMRPipe | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax | |
4 | structure calculation | DYNAMO | Delaglio and Kuszewski | |
5 | refinement | DYNAMO | Delaglio and Kuszewski |