6R3C

Solution structure of birch pollen allergen Bet v 1a


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC0.5 mM [U-13C; U-15N] Betv1a, 0.05 mM sodium chloride, 0.05 mM sodium phosphate90% H2O/10% D2O50 mM8.01 atm298Bruker AvanceII 800
22D 1H-13C HSQC aliphatic0.5 mM [U-13C; U-15N] Betv1a, 0.05 mM sodium chloride, 0.05 mM sodium phosphate90% H2O/10% D2O50 mM8.01 atm298Bruker AvanceII 800
32D 1H-13C HSQC aromatic0.5 mM [U-13C; U-15N] Betv1a, 0.05 mM sodium chloride, 0.05 mM sodium phosphate90% H2O/10% D2O50 mM8.01 atm298Bruker AvanceII 800
43D HNCO0.5 mM [U-13C; U-15N] Betv1a, 0.05 mM sodium chloride, 0.05 mM sodium phosphate90% H2O/10% D2O50 mM8.01 atm298Bruker AvanceII 800
53D HNCA0.5 mM [U-13C; U-15N] Betv1a, 0.05 mM sodium chloride, 0.05 mM sodium phosphate90% H2O/10% D2O50 mM8.01 atm298Bruker AvanceII 800
133D CBCA(CO)NH0.5 mM [U-13C; U-15N] Betv1a, 0.05 mM sodium chloride, 0.05 mM sodium phosphate90% H2O/10% D2O50 mM8.01 atm298Bruker AvanceII 800
123D HNCACB0.5 mM [U-13C; U-15N] Betv1a, 0.05 mM sodium chloride, 0.05 mM sodium phosphate90% H2O/10% D2O50 mM8.01 atm298Bruker AvanceII 800
113D HBHA(CO)NH0.5 mM [U-13C; U-15N] Betv1a, 0.05 mM sodium chloride, 0.05 mM sodium phosphate90% H2O/10% D2O50 mM8.01 atm298Bruker AvanceII 800
103D C(CO)NH0.5 mM [U-13C; U-15N] Betv1a, 0.05 mM sodium chloride, 0.05 mM sodium phosphate90% H2O/10% D2O50 mM8.01 atm298Bruker AvanceII 800
93D HCCH-TOCSY0.5 mM [U-13C; U-15N] Betv1a, 0.05 mM sodium chloride, 0.05 mM sodium phosphate90% H2O/10% D2O50 mM8.01 atm298Bruker Avance 600
83D CCH-TOCSY0.5 mM [U-13C; U-15N] Betv1a, 0.05 mM sodium chloride, 0.05 mM sodium phosphate90% H2O/10% D2O50 mM8.01 atm298Bruker Avance 600
73D 1H-15N NOESY0.5 mM [U-13C; U-15N] Betv1a, 0.05 mM sodium chloride, 0.05 mM sodium phosphate90% H2O/10% D2O50 mM8.01 atm298Bruker AvanceII 800
63D 1H-13C NOESY aliphatic0.5 mM [U-13C; U-15N] Betv1a, 0.05 mM sodium chloride, 0.05 mM sodium phosphate90% H2O/10% D2O50 mM8.01 atm298Bruker AvanceII 800
143D 1H-13C NOESY aromatic0.5 mM [U-13C; U-15N] Betv1a, 0.05 mM sodium chloride, 0.05 mM sodium phosphate90% H2O/10% D2O50 mM8.01 atm298Bruker AvanceII 800
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAvanceII800
2BrukerAvance600
NMR Refinement
MethodDetailsSoftware
simulated annealingXplor-NIH
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number120
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1chemical shift assignmentNMRViewJohnson, One Moon Scientific
2structure calculationXplor-NIHSchwieters, Kuszewski, Tjandra and Clore
3collectionXwinNMRBruker Biospin