6OWR | pdb_00006owr

NMR solution structure of YfiD

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-15N HSQC	0.7 mM [U-15N] YfiD, 18 mM HEPES, 2.7 mM ammonium sulfate, 10 % v/v D2O	90% H2O/10% D2O	2.7 mM	7.2	760 mmHg	293	FBML CMR 600 E 600
2	2D 1H-15N HSQC	1.3 mM [U-100% 13C; U-100% 15N] YfiD, 18 mM HEPES, 2.7 mM ammonium sulfate, 10 % v/v D2O	90% H2O/10% D2O	2.7 mM	7.2	760 mmHg	293	Varian INOVA 800
6	2D 1H-15N HSQC	1.3 mM [U-100% 13C; U-100% 15N] YfiD, 18 mM HEPES, 2.7 mM ammonium sulfate, 10 % v/v D2O	90% H2O/10% D2O	2.7 mM	7.2	760 mmHg	293	Varian INOVA 800
3	3D 1H-15N NOESY	0.7 mM [U-15N] YfiD, 18 mM HEPES, 2.7 mM ammonium sulfate, 10 % v/v D2O	90% H2O/10% D2O	2.7 mM	7.2	760 mmHg	293	FBML CMR 600 E 600
4	3D 1H-15N TOCSY	0.7 mM [U-15N] YfiD, 18 mM HEPES, 2.7 mM ammonium sulfate, 10 % v/v D2O	90% H2O/10% D2O	2.7 mM	7.2	760 mmHg	293	FBML CMR 600 E 600
5	3D HNCA	1.3 mM [U-100% 13C; U-100% 15N] YfiD, 18 mM HEPES, 2.7 mM ammonium sulfate, 10 % v/v D2O	90% H2O/10% D2O	2.7 mM	7.2	760 mmHg	293	Varian INOVA 800
7	3D HNCACB	1.3 mM [U-100% 13C; U-100% 15N] YfiD, 18 mM HEPES, 2.7 mM ammonium sulfate, 10 % v/v D2O	90% H2O/10% D2O	2.7 mM	7.2	760 mmHg	293	Varian INOVA 800
8	3D HBHA(CO)NH	1.3 mM [U-100% 13C; U-100% 15N] YfiD, 18 mM HEPES, 2.7 mM ammonium sulfate, 10 % v/v D2O	90% H2O/10% D2O	2.7 mM	7.2	760 mmHg	293	Varian INOVA 800

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Varian	INOVA	800
2	FBML	CMR 600 E	600

NMR Refinement
Method	Details	Software
molecular dynamics		X-PLOR NIH

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	200
Conformers Submitted Total Number	10
Representative Model	1 (medoid)

Computation: NMR Software
#	Classification	Version	Software Name	Author
2	collection	VNMR		Varian
6	processing	NMRPipe		Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
4	chemical shift assignment	Sparky		Goddard
5	peak picking	Sparky		Goddard
7	structure calculation	Sparky		Goddard
8	structure calculation	CYANA		Guntert, Mumenthaler and Wuthrich
9	structure calculation	X-PLOR NIH		Schwieters, Kuszewski, Tjandra and Clore
1	refinement	X-PLOR NIH		Schwieters, Kuszewski, Tjandra and Clore