6NJF

Solution NMR Structure of DANCER3-F34A, a rigid and natively folded single mutant of the dynamic protein DANCER-3


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D 1H-15N NOESY1.0 mM [U-98% 15N] protein (GB1), 10 mM sodium phosphate90% H2O/10% D2O10 mM sodium phosphate mM7.41 atm298Bruker AVANCE III 600
23D 1H-13C NOESY aliphatic1.0 mM [U-99% 13C; U-98% 15N] protein (GB1), 10 mM sodium phosphate100% D2O10 mM sodium phosphate mM7.41 atm298Bruker AVANCE III 600
33D 1H-13C NOESY aromatic1.0 mM [U-99% 13C; U-98% 15N] protein (GB1), 10 mM sodium phosphate100% D2O10 mM sodium phosphate mM7.41 atm298Bruker AVANCE III 600
43D HNCACB1.0 mM [U-99% 13C; U-98% 15N] protein (GB1), 10 mM sodium phosphate90% H2O/10% D2O10 mM sodium phosphate mM7.41 atm298Bruker AVANCE III 600
53D CBCA(CO)NH1.0 mM [U-99% 13C; U-98% 15N] protein (GB1), 10 mM sodium phosphate90% H2O/10% D2O10 mM sodium phosphate mM7.41 atm298Bruker AVANCE III 600
63D HNCO1.0 mM [U-99% 13C; U-98% 15N] protein (GB1), 10 mM sodium phosphate90% H2O/10% D2O10 mM sodium phosphate mM7.41 atm298Bruker AVANCE III 600
73D CCH-TOCSY1.0 mM [U-99% 13C; U-98% 15N] protein (GB1), 10 mM sodium phosphate100% D2O10 mM sodium phosphate mM7.41 atm298Bruker AVANCE III 600
83D HCCH-TOCSY1.0 mM [U-99% 13C; U-98% 15N] protein (GB1), 10 mM sodium phosphate100% D2O10 mM sodium phosphate mM7.41 atm298Bruker AVANCE III 600
93D HCCH-COSY1.0 mM [U-99% 13C; U-98% 15N] protein (GB1), 10 mM sodium phosphate100% D2O10 mM sodium phosphate mM7.41 atm298Bruker AVANCE III 600
103D 1H-15N TOCSY1.0 mM [U-98% 15N] protein (GB1), 10 mM sodium phosphate90% H2O/10% D2O10 mM sodium phosphate mM7.41 atm298Bruker AVANCE III 600
112D 1H-15N HSQC1.0 mM [U-98% 15N] protein (GB1), 10 mM sodium phosphate90% H2O/10% D2O10 mM sodium phosphate mM7.41 atm298Bruker AVANCE III 600
122D 1H-13C HSQC1.0 mM [U-99% 13C; U-98% 15N] protein (GB1), 10 mM sodium phosphate90% H2O/10% D2O10 mM sodium phosphate mM7.41 atm298Bruker AVANCE III 600
132D 1H-13C HSQC1.0 mM [U-99% 13C; U-98% 15N] protein (GB1), 10 mM sodium phosphate100% D2O10 mM sodium phosphate mM7.41 atm298Bruker AVANCE III 600
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE III600
NMR Refinement
MethodDetailsSoftware
simulated annealingCYANA
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number100
Conformers Submitted Total Number10
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementCYANAGuntert, Mumenthaler and Wuthrich
2structure calculationCYANAGuntert, Mumenthaler and Wuthrich
3chemical shift assignmentNMRViewJohnson, One Moon Scientific
4peak pickingNMRViewJohnson, One Moon Scientific
5collectionTopSpinBruker Biospin
6processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax