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NMR solution structure of regulatory ACT domain of the Mycobacterium tuberculosis Rel protein
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 0.5 mM [U-15N] MtRel ACT domain, 50 mM sodium phosphate, 350 mM sodium chloride, 5 % v/v glycerol, 0.01 % w/v sodium azide 90% H2O/10% D2O 350 mM 7.5 1 atm 298 Bruker AVANCE 700 2 3D HNCACB 0.5 mM [U-99% 13C; U-99% 15N] MtRel ACT domain, 50 mM sodium phosphate, 350 mM sodium chloride, 5 % v/v glycerol, 0.01 % w/v sodium azide 90% H2O/10% D2O 350 mM 7.5 1 atm 298 Bruker AVANCE 700 3 3D CBCA(CO)NH 0.5 mM [U-99% 13C; U-99% 15N] MtRel ACT domain, 50 mM sodium phosphate, 350 mM sodium chloride, 5 % v/v glycerol, 0.01 % w/v sodium azide 90% H2O/10% D2O 350 mM 7.5 1 atm 298 Bruker AVANCE 700 4 3D HNCA 0.5 mM [U-99% 13C; U-99% 15N] MtRel ACT domain, 50 mM sodium phosphate, 350 mM sodium chloride, 5 % v/v glycerol, 0.01 % w/v sodium azide 90% H2O/10% D2O 350 mM 7.5 1 atm 298 Bruker AVANCE 700 5 3D HN(CO)CA 0.5 mM [U-99% 13C; U-99% 15N] MtRel ACT domain, 50 mM sodium phosphate, 350 mM sodium chloride, 5 % v/v glycerol, 0.01 % w/v sodium azide 90% H2O/10% D2O 350 mM 7.5 1 atm 298 Bruker AVANCE 700 6 3D HCCH-TOCSY 0.5 mM [U-99% 13C; U-99% 15N] MtRel ACT domain, 50 mM sodium phosphate, 350 mM sodium chloride, 5 % v/v glycerol, 0.01 % w/v sodium azide 90% H2O/10% D2O 350 mM 7.5 1 atm 298 Bruker AVANCE 700 7 3D 1H-15N NOESY 0.5 mM [U-99% 13C; U-99% 15N] MtRel ACT domain, 50 mM sodium phosphate, 350 mM sodium chloride, 5 % v/v glycerol, 0.01 % w/v sodium azide 90% H2O/10% D2O 350 mM 7.5 1 atm 298 Bruker AVANCE 700 8 3D 1H-13C NOESY 0.5 mM [U-99% 13C; U-99% 15N] MtRel ACT domain, 50 mM sodium phosphate, 350 mM sodium chloride, 5 % v/v glycerol, 0.01 % w/v sodium azide 90% H2O/10% D2O 350 mM 7.5 1 atm 298 Bruker AVANCE 700
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 700
NMR Refinement Method Details Software simulated annealing CNS
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 100 Conformers Submitted Total Number 21 Representative Model 1 (minimized average structure)
Computation: NMR Software # Classification Version Software Name Author 1 collection TopSpin Bruker Biospin 2 processing NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 3 processing NMRDraw Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 4 data analysis Sparky Goddard 5 structure calculation CYANA 2.1 Guntert, Mumenthaler and Wuthrich 6 refinement CNS 1.2 Brunger, Adams, Clore, Gros, Nilges and Read