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NMR structure and dynamics studies of yeast respiratory super-complex factor 2 in micelles
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 TROSY-HSQC 0.5 mM [U-99% 15N] Rcf2 90% H2O/10% D2O 25 mM 5 1 atm 323 Bruker AVANCE III 900 2 Backbone Experiments 0.5 mM 15N_2H_13C Rcf2 90% H2O/10% D2O 25 mM 5 1 atm 323 Bruker AVANCE III 900 3 Side-chain Experiments 0.5 mM [13C, 15N] Rcf2 90% H2O/10% D2O 25 mM 5 1 atm 323 Bruker AVANCE III 900 4 Side-chain Experiments 0.5 mM 15N_50%-2H_13C Rcf2 90% H2O/10% D2O 25 mM 5 1 atm 323 Bruker AVANCE III 900 5 NOE Experiments 0.5 mM 15N_50%-2H_13C Rcf2 90% H2O/10% D2O 25 mM 5 1 atm 323 Bruker AVANCE III 900 6 NOE Experiments 0.5 mM [13C, 15N] Rcf2 90% H2O/10% D2O 25 mM 5 1 atm 323 Bruker AVANCE III 900 7 NOE Experiments 0.5 mM 50% [13C, 15N] and 50% [12C, 14N] Rcf2 90% H2O/10% D2O 25 mM 5 1 atm 323 Bruker AVANCE III 900
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE III 600 2 Bruker AVANCE III 700 3 Bruker AVANCE III 900
NMR Refinement Method Details Software simulated annealing CNS
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 100 Conformers Submitted Total Number 15 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 collection TopSpin Bruker Biospin 2 data analysis CcpNmr Analysis CCPN 3 structure calculation CNS Brunger, Adams, Clore, Gros, Nilges and Read 4 refinement CNS Brunger, Adams, Clore, Gros, Nilges and Read