6LMR | pdb_00006lmr

Solution structure of cold shock domain and ssDNA complex

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-15N HSQC	1 mM [U-100% 13C; U-100% 15N] csd	90% H2O/10% D2O	50 mM	7.4	1 atm	298	Bruker AVANCE 800
2	2D 1H-13C HSQC aliphatic	1 mM [U-100% 13C; U-100% 15N] csd	90% H2O/10% D2O	50 mM	7.4	1 atm	298	Bruker AVANCE 800
3	3D HNCA	1 mM [U-100% 13C; U-100% 15N] csd	90% H2O/10% D2O	50 mM	7.4	1 atm	298	Bruker AVANCE 800
4	3D HN(CO)CA	1 mM [U-100% 13C; U-100% 15N] csd	90% H2O/10% D2O	50 mM	7.4	1 atm	298	Bruker AVANCE 800
5	3D HCCH-TOCSY	1 mM [U-100% 13C; U-100% 15N] csd	90% H2O/10% D2O	50 mM	7.4	1 atm	298	Bruker AVANCE 800
6	4D NOESY	1 mM [U-100% 13C; U-100% 15N] csd	90% H2O/10% D2O	50 mM	7.4	1 atm	298	Bruker AVANCE 800
7	3D filtered NOEST	1 mM [U-100% 13C; U-100% 15N] csd	90% H2O/10% D2O	50 mM	7.4	1 atm	298	Bruker AVANCE 800
8	2D 13C/15N filtered TOCSY	1 mM [U-100% 13C; U-100% 15N] csd	90% H2O/10% D2O	50 mM	7.4	1 atm	298	Bruker AVANCE 800
9	2D 13C/15N filtered NOESY	1 mM [U-100% 13C; U-100% 15N] csd	90% H2O/10% D2O	50 mM	7.4	1 atm	298	Bruker AVANCE 800

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	AVANCE	800

NMR Refinement
Method	Details	Software
simulated annealing		X-PLOR NIH

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	100
Conformers Submitted Total Number	20
Representative Model	1 (medoid)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	collection	TopSpin		Bruker Biospin
2	processing	NMRPipe		Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
3	data analysis	Sparky		Goddard
4	structure calculation	X-PLOR NIH		Schwieters, Kuszewski, Tjandra and Clore
5	refinement	X-PLOR NIH		Schwieters, Kuszewski, Tjandra and Clore
6	chemical shift assignment	Sparky		Goddard
7	peak picking	Sparky		Goddard