6KRA
Solution NMR Structure of RMAD4 alpha Defensin
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-1H TOCSY | 1 mM Rehesus macaque Myeloid Alpha Defensin 4, 0.01 % v/v Glacial Acetric acid, 90 % v/v H2O, 10 % v/v [U-99% 2H] D2O | 90% H2O/10% D2O | 0 | 3.7 | 760 mmHg | 298 | Bruker Ascend 750 |
2 | 2D 1H-13C HSQC | 1 mM Rehesus macaque Myeloid Alpha Defensin 4, 0.01 % v/v Glacial Acetric acid, 90 % v/v H2O, 10 % v/v [U-99% 2H] D2O | 90% H2O/10% D2O | 0 | 3.7 | 760 mmHg | 298 | Bruker Ascend 750 |
3 | 2D 1H-1H NOESY | 1 mM Rehesus macaque Myeloid Alpha Defensin 4, 0.01 % v/v Glacial Acetric acid, 90 % v/v H2O, 10 % v/v [U-99% 2H] D2O | 90% H2O/10% D2O | 0 | 3.7 | 760 mmHg | 298 | Bruker Ascend 750 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | Ascend | 750 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
simulated annealing |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | target function |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 10 |
Representative Model | 1 (target function) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
8 | processing | TopSpin | Bruker Biospin | |
9 | chemical shift assignment | CcpNmr Analysis | CCPN | |
10 | structure calculation | CYANA | Guntert, Mumenthaler and Wuthrich | |
11 | refinement | CNS | Brunger, Adams, Clore, Gros, Nilges and Read |