6KFJ

NMR solution structure of the 1:1 complex of wtTel26 G-quadruplex and a tripodal cationic fluorescent probe NBTE


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D NOESY1 mM G-quadruplex DNA wtTel26, 1 mM NBTE, 100 mM patassium90% H2O/10% D2O100 mM71 atm298Bruker AVANCE III 700
22D TOCSY1 mM G-quadruplex DNA wtTel26, 1 mM NBTE, 100 mM patassium90% H2O/10% D2O100 mM71 atm298Bruker AVANCE III 700
32D COSY1 mM G-quadruplex DNA wtTel26, 1 mM NBTE, 100 mM patassium90% H2O/10% D2O100 mM71 atm298Bruker AVANCE III 700
42D NOESY1 mM G-quadruplex DNA wtTel26, 1 mM NBTE, 100 mM patassium90% H2O/10% D2O100 mM71 atm278Bruker AVANCE III 600
52D TOCSY1 mM G-quadruplex DNA wtTel26, 1 mM NBTE, 100 mM patassium90% H2O/10% D2O100 mM71 atm278Bruker AVANCE III 600
62D COSY1 mM G-quadruplex DNA wtTel26, 1 mM NBTE, 100 mM patassium90% H2O/10% D2O100 mM71 atm278Bruker AVANCE III 600
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE III700
2BrukerAVANCE III600
NMR Refinement
MethodDetailsSoftware
DGSA-distance geometry simulated annealingX-PLOR NIH
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number100
Conformers Submitted Total Number15
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementX-PLOR NIHSchwieters, Kuszewski, Tjandra and Clore
2structure calculationX-PLOR NIHSchwieters, Kuszewski, Tjandra and Clore
3chemical shift assignmentSparkyGoddard
4peak pickingSparkyGoddard