6K5W | pdb_00006k5w

Solution structure of the chromodomain of yeast Eaf3

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-15N HSQC	1.47 mM [U-13C,15N] Eaf3	90% H2O/10% D2O	30 mM	6.8	1 atm	298	Bruker AVANCE 600
2	2D 1H-13C HSQC	1.47 mM [U-13C,15N] Eaf3	100% D2O	30 mM	6.8	1 atm	298	Bruker AVANCE 800
3	3D CBCANH	1.47 mM [U-13C,15N] Eaf3	90% H2O/10% D2O	30 mM	6.8	1 atm	298	Bruker AVANCE 600
4	3D CBCA(CO)NH	1.47 mM [U-13C,15N] Eaf3	90% H2O/10% D2O	30 mM	6.8	1 atm	298	Bruker AVANCE 600
5	3D HNCA	1.47 mM [U-13C,15N] Eaf3	90% H2O/10% D2O	30 mM	6.8	1 atm	298	Bruker AVANCE 600
12	3D HN(CO)CA	1.47 mM [U-13C,15N] Eaf3	90% H2O/10% D2O	30 mM	6.8	1 atm	298	Bruker AVANCE 600
10	3D HNCO	1.47 mM [U-13C,15N] Eaf3	90% H2O/10% D2O	30 mM	6.8	1 atm	298	Bruker AVANCE 600
11	3D HN(CA)CO	1.47 mM [U-13C,15N] Eaf3	90% H2O/10% D2O	30 mM	6.8	1 atm	298	Bruker AVANCE 600
9	3D HBHA(CO)NH	1.47 mM [U-13C,15N] Eaf3	90% H2O/10% D2O	30 mM	6.8	1 atm	298	Bruker AVANCE 600
8	3D CC(CO)NH	1.47 mM [U-13C,15N] Eaf3	90% H2O/10% D2O	30 mM	6.8	1 atm	298	Bruker AVANCE 500
7	3D H(CC)(CO)HN	1.47 mM [U-13C,15N] Eaf3	90% H2O/10% D2O	30 mM	6.8	1 atm	298	Bruker AVANCE 500
6	3D HCCH-TOCSY	1.47 mM [U-13C,15N] Eaf3	100% D2O	30 mM	6.8	1 atm	298	Bruker AVANCE 800
22	3D HCCH-COSY	1.47 mM [U-13C,15N] Eaf3	100% D2O	30 mM	6.8	1 atm	298	Bruker AVANCE 500
13	3D HNHA	1.47 mM [U-13C,15N] Eaf3	90% H2O/10% D2O	30 mM	6.8	1 atm	298	Bruker AVANCE 800
16	3D HNHB	1.47 mM [U-13C,15N] Eaf3	90% H2O/10% D2O	30 mM	6.8	1 atm	298	Bruker AVANCE 600
15	3D HN(CO)HB	1.47 mM [U-13C,15N] Eaf3	90% H2O/10% D2O	30 mM	6.8	1 atm	298	Bruker AVANCE 600
14	3D HNCG	1.47 mM [U-13C,15N] Eaf3	90% H2O/10% D2O	30 mM	6.8	1 atm	298	Bruker AVANCE 600
17	3D HN(CO)CG	1.47 mM [U-13C,15N] Eaf3	90% H2O/10% D2O	30 mM	6.8	1 atm	298	Bruker AVANCE 600
19	2D CGCBH	1.47 mM [U-13C,15N] Eaf3	100% D2O	30 mM	6.8	1 atm	298	Bruker AVANCE 800
23	2D CGCDH	1.47 mM [U-13C,15N] Eaf3	100% D2O	30 mM	6.8	1 atm	298	Bruker AVANCE 800
21	2D CGCEH	1.47 mM [U-13C,15N] Eaf3	100% D2O	30 mM	6.8	1 atm	298	Bruker AVANCE 800
20	2D HBCBCDHD	1.47 mM [U-13C,15N] Eaf3	100% D2O	30 mM	6.8	1 atm	298	Bruker AVANCE 800
18	2D HBCBCGCEHE	1.47 mM [U-13C,15N] Eaf3	100% D2O	30 mM	6.8	1 atm	298	Bruker AVANCE 800
25	2D DQF-COSY	1.47 mM [U-13C,15N] Eaf3	100% D2O	30 mM	6.8	1 atm	298	Bruker AVANCE 600
24	2D 1H-1H TOCSY	1.47 mM [U-13C,15N] Eaf3	100% D2O	30 mM	6.8	1 atm	298	Bruker AVANCE 600
27	3D 1H-15N NOESY	1.47 mM [U-13C,15N] Eaf3	90% H2O/10% D2O	30 mM	6.8	1 atm	298	Bruker AVANCE 800
26	3D 1H-13C NOESY	1.47 mM [U-13C,15N] Eaf3	100% D2O	30 mM	6.8	1 atm	298	Bruker AVANCE 800

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	AVANCE	500
2	Bruker	AVANCE	600
3	Bruker	AVANCE	800

NMR Refinement
Method	Details	Software
simulated annealing		X-PLOR NIH

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	200
Conformers Submitted Total Number	20
Representative Model	1 (lowest energy)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	processing	NMRDraw		Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
2	peak picking	NMRView		Johnson, One Moon Scientific
3	chemical shift assignment	NMRView		Johnson, One Moon Scientific
4	structure calculation	X-PLOR NIH		Schwieters, Kuszewski, Tjandra and Clore
5	refinement	X-PLOR NIH		Schwieters, Kuszewski, Tjandra and Clore
6	data analysis	MOLMOL		Koradi, Billeter and Wuthrich
8	data analysis	PROCHECK / PROCHECK-NMR		Laskowski, MacArthur, Smith, Jones, Hutchinson, Morris, Moss and Thornton