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Solution structure of IFN alpha8
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 3D HNCACB 0.4 mM [U-13C; U-15N] Interferon 90% H2O/10% D2O 20 mM 3.4 1 atm 303 Bruker AVANCE II 800 2 3D CBCA(CO)NH 0.4 mM [U-13C; U-15N] Interferon 90% H2O/10% D2O 20 mM 3.4 1 atm 303 Bruker AVANCE II 800 3 3D HNCO 0.4 mM [U-13C; U-15N] Interferon 90% H2O/10% D2O 20 mM 3.4 1 atm 303 Bruker AVANCE II 800 4 HN(CA)CO 0.4 mM [U-13C; U-15N] Interferon 90% H2O/10% D2O 20 mM 3.4 1 atm 303 Bruker AVANCE II 800 5 3D HN(CO)CA 0.4 mM [U-13C; U-15N] Interferon 90% H2O/10% D2O 20 mM 3.4 1 atm 303 Bruker AVANCE II 800 6 3D 1H-15N NOESY 0.4 mM [U-13C; U-15N] Interferon 90% H2O/10% D2O 20 mM 3.4 1 atm 303 Bruker AVANCE II 800 7 3D 1H-13C NOESY 0.4 mM [U-13C; U-15N] Interferon 90% H2O/10% D2O 20 mM 3.4 1 atm 303 Bruker AVANCE II 800 8 2D 1H-15N HSQC 0.4 mM [U-13C; U-15N] Interferon 90% H2O/10% D2O 20 mM 3.4 1 atm 303 Bruker AVANCE II 800 9 2D 1H-13C HSQC 0.4 mM [U-13C; U-15N] Interferon 90% H2O/10% D2O 20 mM 3.4 1 atm 303 Bruker AVANCE II 800
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE II 800
NMR Refinement Method Details Software torsion angle dynamics CNS
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 500 Conformers Submitted Total Number 15 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 refinement CNS Brunger A. T. et.al. 2 structure calculation CNS Brunger, Adams, Clore, Gros, Nilges and Read 3 chemical shift assignment NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 4 peak picking NMRView Johnson, One Moon Scientific