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Solution structure of Ufm1 protein from Trypanosoma brucei
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 1.5 mM [U-13C; U-15N] Ufm1, 150 mM sodium chloride, 20 mM sodium phosphate, 2 mM EDTA, 2 mM DTT 90% H2O/10% D2O 150 mM 6.8 1 atm 298 Bruker DMX 600 2 3D 1H-15N NOESY 1.5 mM [U-13C; U-15N] Ufm1, 150 mM sodium chloride, 20 mM sodium phosphate, 2 mM EDTA, 2 mM DTT 90% H2O/10% D2O 150 mM 6.8 1 atm 298 Bruker DMX 600
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker DMX 600
NMR Refinement Method Details Software simulated annealing X-PLOR NIH
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 500 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 refinement X-PLOR NIH Schwieters, Kuszewski, Tjandra and Clore 2 chemical shift assignment Sparky Goddard 3 collection NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 4 structure calculation CYANA Guntert, Mumenthaler and Wuthrich