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Solution structure of camelid nanobody Nb26 against aflatoxin B1
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 0.45 mM [U-100% 13C; U-100% 15N] camelid nanobody 26 90% H2O/10% D2O 0.15 M 7.0 1 atm 298 Bruker AVANCE III 600 2 2D 1H-13C HSQC aliphatic 0.45 mM [U-100% 13C; U-100% 15N] camelid nanobody 26 90% H2O/10% D2O 0.15 M 7.0 1 atm 298 Bruker AVANCE III 600 3 2D 1H-13C HSQC aromatic 0.45 mM [U-100% 13C; U-100% 15N] camelid nanobody 26 90% H2O/10% D2O 0.15 M 7.0 1 atm 298 Bruker AVANCE III 600 4 3D HNCO 0.45 mM [U-100% 13C; U-100% 15N] camelid nanobody 26 90% H2O/10% D2O 0.15 M 7.0 1 atm 298 Bruker AVANCE III 600 5 3D HN(CA)CO 0.45 mM [U-100% 13C; U-100% 15N] camelid nanobody 26 90% H2O/10% D2O 0.15 M 7.0 1 atm 298 Bruker AVANCE III 600 11 3D HNCA 0.45 mM [U-100% 13C; U-100% 15N] camelid nanobody 26 90% H2O/10% D2O 0.15 M 7.0 1 atm 298 Bruker AVANCE III 600 10 3D HN(CA)CO 0.45 mM [U-100% 13C; U-100% 15N] camelid nanobody 26 90% H2O/10% D2O 0.15 M 7.0 1 atm 298 Bruker AVANCE III 600 9 3D CBCA(CO)NH 0.45 mM [U-100% 13C; U-100% 15N] camelid nanobody 26 90% H2O/10% D2O 0.15 M 7.0 1 atm 298 Bruker AVANCE III 600 8 3D HNCACB 0.45 mM [U-100% 13C; U-100% 15N] camelid nanobody 26 90% H2O/10% D2O 0.15 M 7.0 1 atm 298 Bruker AVANCE III 600 7 3D HBHA(CO)NH 0.45 mM [U-100% 13C; U-100% 15N] camelid nanobody 26 90% H2O/10% D2O 0.15 M 7.0 1 atm 298 Bruker AVANCE III 600 6 3D C(CO)NH 0.45 mM [U-100% 13C; U-100% 15N] camelid nanobody 26 90% H2O/10% D2O 0.15 M 7.0 1 atm 298 Bruker AVANCE III 600 18 3D H(CCO)NH 0.45 mM [U-100% 13C; U-100% 15N] camelid nanobody 26 90% H2O/10% D2O 0.15 M 7.0 1 atm 298 Bruker AVANCE III 600 17 3D HCCH-TOCSY 0.45 mM [U-100% 13C; U-100% 15N] camelid nanobody 26 90% H2O/10% D2O 0.15 M 7.0 1 atm 298 Bruker AVANCE III 600 25 3D 1H-15N NOESY 0.55 mM [U-100% 13C; U-100% 15N] camelid nanobody 26 90% H2O/10% D2O 0.15 M 7.0 1 atm 298 Bruker AVANCE III 850 24 3D 1H-13C NOESY aliphatic 0.55 mM [U-100% 13C; U-100% 15N] camelid nanobody 26 90% H2O/10% D2O 0.15 M 7.0 1 atm 298 Bruker AVANCE III 850 53 3D 1H-13C NOESY aromatic 0.55 mM [U-100% 13C; U-100% 15N] camelid nanobody 26 90% H2O/10% D2O 0.15 M 7.0 1 atm 298 Bruker AVANCE III 850
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE III 600 2 Bruker AVANCE III 850
NMR Refinement Method Details Software molecular dynamics CNS
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 100 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 refinement CNS Brunger, Adams, Clore, Gros, Nilges and Read 2 structure calculation CYANA Guntert, Mumenthaler and Wuthrich 3 chemical shift assignment Sparky Goddard 4 peak picking Sparky Goddard