6IYN | pdb_00006iyn

Solution structure of camelid nanobody Nb26 against aflatoxin B1

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-15N HSQC	0.45 mM [U-100% 13C; U-100% 15N] camelid nanobody 26	90% H2O/10% D2O	0.15 M	7.0	1 atm	298	Bruker AVANCE III 600
2	2D 1H-13C HSQC aliphatic	0.45 mM [U-100% 13C; U-100% 15N] camelid nanobody 26	90% H2O/10% D2O	0.15 M	7.0	1 atm	298	Bruker AVANCE III 600
3	2D 1H-13C HSQC aromatic	0.45 mM [U-100% 13C; U-100% 15N] camelid nanobody 26	90% H2O/10% D2O	0.15 M	7.0	1 atm	298	Bruker AVANCE III 600
4	3D HNCO	0.45 mM [U-100% 13C; U-100% 15N] camelid nanobody 26	90% H2O/10% D2O	0.15 M	7.0	1 atm	298	Bruker AVANCE III 600
5	3D HN(CA)CO	0.45 mM [U-100% 13C; U-100% 15N] camelid nanobody 26	90% H2O/10% D2O	0.15 M	7.0	1 atm	298	Bruker AVANCE III 600
11	3D HNCA	0.45 mM [U-100% 13C; U-100% 15N] camelid nanobody 26	90% H2O/10% D2O	0.15 M	7.0	1 atm	298	Bruker AVANCE III 600
10	3D HN(CA)CO	0.45 mM [U-100% 13C; U-100% 15N] camelid nanobody 26	90% H2O/10% D2O	0.15 M	7.0	1 atm	298	Bruker AVANCE III 600
9	3D CBCA(CO)NH	0.45 mM [U-100% 13C; U-100% 15N] camelid nanobody 26	90% H2O/10% D2O	0.15 M	7.0	1 atm	298	Bruker AVANCE III 600
8	3D HNCACB	0.45 mM [U-100% 13C; U-100% 15N] camelid nanobody 26	90% H2O/10% D2O	0.15 M	7.0	1 atm	298	Bruker AVANCE III 600
7	3D HBHA(CO)NH	0.45 mM [U-100% 13C; U-100% 15N] camelid nanobody 26	90% H2O/10% D2O	0.15 M	7.0	1 atm	298	Bruker AVANCE III 600
6	3D C(CO)NH	0.45 mM [U-100% 13C; U-100% 15N] camelid nanobody 26	90% H2O/10% D2O	0.15 M	7.0	1 atm	298	Bruker AVANCE III 600
18	3D H(CCO)NH	0.45 mM [U-100% 13C; U-100% 15N] camelid nanobody 26	90% H2O/10% D2O	0.15 M	7.0	1 atm	298	Bruker AVANCE III 600
17	3D HCCH-TOCSY	0.45 mM [U-100% 13C; U-100% 15N] camelid nanobody 26	90% H2O/10% D2O	0.15 M	7.0	1 atm	298	Bruker AVANCE III 600
25	3D 1H-15N NOESY	0.55 mM [U-100% 13C; U-100% 15N] camelid nanobody 26	90% H2O/10% D2O	0.15 M	7.0	1 atm	298	Bruker AVANCE III 850
24	3D 1H-13C NOESY aliphatic	0.55 mM [U-100% 13C; U-100% 15N] camelid nanobody 26	90% H2O/10% D2O	0.15 M	7.0	1 atm	298	Bruker AVANCE III 850
53	3D 1H-13C NOESY aromatic	0.55 mM [U-100% 13C; U-100% 15N] camelid nanobody 26	90% H2O/10% D2O	0.15 M	7.0	1 atm	298	Bruker AVANCE III 850

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	AVANCE III	600
2	Bruker	AVANCE III	850

NMR Refinement
Method	Details	Software
molecular dynamics		CNS

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	100
Conformers Submitted Total Number	20
Representative Model	1 (lowest energy)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	refinement	CNS		Brunger, Adams, Clore, Gros, Nilges and Read
2	structure calculation	CYANA		Guntert, Mumenthaler and Wuthrich
3	chemical shift assignment	Sparky		Goddard
4	peak picking	Sparky		Goddard