SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 2D 1H-1H NOESY | 1.0 mM No labeling DNA, 10.0 mM No labeling sodium phosphate, 0.020 mM No labeling DSS | 100% D2O | 10.0 mM | 7.0 | 1 bar | 278 | Bruker AVANCE 700 |
| 2 | 2D 1H-1H TOCSY | 1.0 mM No labeling DNA, 10.0 mM No labeling sodium phosphate, 0.020 mM No labeling DSS | 100% D2O | 10.0 mM | 7.0 | 1 bar | 278 | Bruker AVANCE 700 |
| 3 | 2D DQF-COSY | 1.0 mM No labeling DNA, 10.0 mM No labeling sodium phosphate, 0.020 mM No labeling DSS | 100% D2O | 10.0 mM | 7.0 | 1 bar | 278 | Bruker AVANCE 500 |
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | AVANCE | 500 |
| 2 | Bruker | AVANCE | 700 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| restrained molecular dynamics | Amber | |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | structures with the lowest energy |
| Conformers Calculated Total Number | 1000 |
| Conformers Submitted Total Number | 20 |
| Representative Model | 1 (lowest energy) |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | refinement | Amber | 16 | Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman |
| 2 | chemical shift assignment | TopSpin | Bruker Biospin | |














