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Outward facing structure of apo CST
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 6I1R
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6.5 293 35 % (v/v) PEG 400, 0.1 M NaCl, 0.1 M MES
Crystal Properties Matthews coefficient Solvent content 4.6 73.25
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 51.58 α = 82.83 b = 69.46 β = 83.43 c = 102.03 γ = 68.22
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS3 6M 2015-02-22 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON DIAMOND BEAMLINE I03 0.97625 Diamond I03
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 3.4 47.77 99.2 0.122 0.133 0.052 0.984 7.3 6.4 17696
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 3.4 3.68 97.7 1.323 1.458 0.59 0.532 5.1
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 6I1R 3.4 21.95 16820 816 98.87 0.2687 0.2679 0.2729 0.2859 0.2851 RANDOM 161.973
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.07 -0.07 -0.06 -0.04 0.07 0.06
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.252 r_dihedral_angle_3_deg 18.48 r_dihedral_angle_4_deg 6.346 r_dihedral_angle_1_deg 5.31 r_angle_refined_deg 1.311 r_angle_other_deg 0.508 r_chiral_restr 0.086 r_bond_refined_d 0.009 r_gen_planes_refined 0.007 r_bond_other_d 0.001
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.252 r_dihedral_angle_3_deg 18.48 r_dihedral_angle_4_deg 6.346 r_dihedral_angle_1_deg 5.31 r_angle_refined_deg 1.311 r_angle_other_deg 0.508 r_chiral_restr 0.086 r_bond_refined_d 0.009 r_gen_planes_refined 0.007 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4290 Nucleic Acid Atoms Solvent Atoms Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement Aimless data scaling PDB_EXTRACT data extraction XDS data reduction PHASER phasing