6HQC

Structural investigation of the TasA anchoring protein TapA from Bacillus subtilis


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP9.529320% PEG MME 550, 0.1M NaCl, 0.1M Bicine pH 9.5
Crystal Properties
Matthews coefficientSolvent content
2.2946.25

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 30.103α = 90
b = 61.135β = 106.93
c = 34.291γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100PIXELDECTRIS PILATUS3 6M2018-03-06MMAD
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONBESSY BEAMLINE 14.10.91841, 0.9795BESSY14.1

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Rrim I (All)CC (Half)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.2832.898.40.00450.99914.194.443025026.69
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)Rrim I (All)CC (Half)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.281.3997.20.1770.4320.85

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONSADTHROUGHOUT1.2832.828736151398.530.149690.147180.19715RANDOM28.05
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.19-0.030.59-0.32
RMS Deviations
KeyRefinement Restraint Deviation
r_sphericity_free29.369
r_dihedral_angle_2_deg28.476
r_dihedral_angle_3_deg13.277
r_dihedral_angle_4_deg13.19
r_sphericity_bonded11.412
r_dihedral_angle_1_deg6.552
r_long_range_B_refined5.301
r_long_range_B_other5.299
r_scangle_other3.55
r_mcangle_it3.008
RMS Deviations
KeyRefinement Restraint Deviation
r_sphericity_free29.369
r_dihedral_angle_2_deg28.476
r_dihedral_angle_3_deg13.277
r_dihedral_angle_4_deg13.19
r_sphericity_bonded11.412
r_dihedral_angle_1_deg6.552
r_long_range_B_refined5.301
r_long_range_B_other5.299
r_scangle_other3.55
r_mcangle_it3.008
r_mcangle_other3.007
r_scbond_it3.006
r_scbond_other3.004
r_mcbond_it2.475
r_mcbond_other2.474
r_rigid_bond_restr2.189
r_angle_refined_deg1.686
r_angle_other_deg0.95
r_chiral_restr0.133
r_bond_refined_d0.012
r_gen_planes_refined0.007
r_bond_other_d0.004
r_gen_planes_other0.003
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_scangle_it
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms928
Nucleic Acid Atoms
Solvent Atoms213
Heterogen Atoms16

Software

Software
Software NamePurpose
REFMACrefinement
XDSdata reduction
XSCALEdata scaling
Auto-Rickshawphasing