6HPI
NMR structure of the pro-inflammatory cytokine interleukin-36alpha
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 2D 1H-15N HSQC | 1.3 mM [U-100% 15N] Interleukin-36alpha, 20 mM no sodium phosphate | 90% H2O/10% D2O | 0 M | 6.9 | 1 atm | 273 | Bruker AVANCE III 750 |
| 2 | 2D 1H-13C HSQC | 1.3 mM [U-100% 13C; U-100% 15N] Interleukin-36alpha, 20 mM no sodium phosphate | 90% H2O/10% D2O | 0 M | 6.9 | 1 atm | 273 | Bruker AVANCE III 750 |
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | AVANCE III | 750 |
| 2 | Bruker | AVANCE III | 700 |
| 3 | Bruker | AVANCE III | 600 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| molecular dynamics | energy minimisation | OPALp |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | structures with the least restraint violations |
| Conformers Calculated Total Number | 100 |
| Conformers Submitted Total Number | 20 |
| Representative Model | 1 (closest to the average) |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | refinement | OPALp | Luginbuhl, Guntert, Billeter and Wuthrich | |
| 2 | structure calculation | CYANA | Guntert, Mumenthaler and Wuthrich | |
| 3 | chemical shift assignment | CcpNmr Analysis | CCPN | |
| 4 | peak picking | CcpNmr Analysis | CCPN | |
