6HNE
Peptide-membrane interaction between targeting and lysis
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | NOESY | 10 mM peptide | trifluoroethanol/water | 0 mM | 5 | AMBIENT Pa | 291 | Bruker AVANCE III 500 |
| 2 | 2D DQF-COSY | 10 mM peptide | trifluoroethanol/water | 0 mM | 5 | AMBIENT Pa | 291 | Bruker AVANCE III 500 |
| 3 | 2D 1H-13C HSQC | 10 mM peptide | trifluoroethanol/water | 0 mM | 5 | AMBIENT Pa | 291 | Bruker AVANCE III 500 |
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | AVANCE III | 500 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| torsion angle dynamics | Amber | |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | structures with the least restraint violations |
| Conformers Calculated Total Number | 30 |
| Conformers Submitted Total Number | 20 |
| Representative Model | 1 (lowest energy) |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | structure calculation | CYANA | 3.97 | Guntert, Mumenthaler and Wuthrich |
| 7 | chemical shift assignment | Sparky | Goddard | |
| 6 | refinement | Amber | Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman | |
