X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP2930.1 M MES pH 6.5, 25% PEG3000
Crystal Properties
Matthews coefficientSolvent content
2.2946.4

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 45α = 90
b = 79β = 90
c = 98.9γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100PIXELDECTRIS EIGER X 16M2017-07-15MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONSLS BEAMLINE X06SA1.0SLSX06SA

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.554099.70.04518.15.851808
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.551.6599.70.5363.4

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONSADTHROUGHOUT1.551549149258799.560.161730.160460.18635RANDOM27.517
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-1.390.470.92
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg31.566
r_sphericity_free20.18
r_dihedral_angle_4_deg15.902
r_dihedral_angle_3_deg12.444
r_dihedral_angle_1_deg5.832
r_sphericity_bonded5.753
r_long_range_B_refined2.39
r_long_range_B_other2.09
r_scangle_other1.598
r_scbond_it1.478
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg31.566
r_sphericity_free20.18
r_dihedral_angle_4_deg15.902
r_dihedral_angle_3_deg12.444
r_dihedral_angle_1_deg5.832
r_sphericity_bonded5.753
r_long_range_B_refined2.39
r_long_range_B_other2.09
r_scangle_other1.598
r_scbond_it1.478
r_scbond_other1.474
r_mcangle_it1.408
r_mcangle_other1.408
r_angle_refined_deg1.205
r_mcbond_it1.182
r_mcbond_other1.18
r_rigid_bond_restr0.907
r_angle_other_deg0.883
r_chiral_restr0.072
r_bond_refined_d0.007
r_gen_planes_refined0.005
r_bond_other_d0.001
r_gen_planes_other0.001
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_scangle_it
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2682
Nucleic Acid Atoms
Solvent Atoms305
Heterogen Atoms2

Software

Software
Software NamePurpose
REFMACrefinement
XDSdata reduction
XSCALEdata scaling
CRANK2phasing