6H1M

Neutron structure of Lactobacillus brevis alcohol dehydrogenase


NEUTRON DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP7293.15PEG 550 MME, Magnesium chloride, HEPES

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 56.508α = 90
b = 84.572β = 90
c = 115.419γ = 90
Symmetry
Space GroupI 2 2 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11neutron293.15IMAGE PLATEMAATEL BIODIFF2018-06-01MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1NUCLEAR REACTORFRM II BEAMLINE BIODIFF2.675FRM IIBIODIFF

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Rrim I (All)Rpim I (All)CC (Half)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.1521.7691.560.1550.1920.1110.9955.142.61412114.47
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Rrim I (All)Rpim I (All)CC (Half)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.152.2379.010.3680.4660.2820.612.242.2

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Cut-off Sigma (F)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeMean Isotropic B
NEUTRON DIFFRACTIONMOLECULAR REPLACEMENTFREE R-VALUE6H072.1521.7591.3514119141291.560.2210.21770.2493
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
f_dihedral_angle_d19.665
f_angle_d2.828
f_bond_d0.061
f_chiral_restr0.06
f_plane_restr0.006

Software

Software
Software NamePurpose
PHENIXrefinement
HKL-2000data reduction
Cootmodel building
HKL-2000data scaling
PHASERphasing