6GIL
NMR structure of temporin B in SDS micelles
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 2D 1H-1H TOCSY | 100 mM U-98% 2H deuterated sodium dodecyl sulphate, 2 mM temporin B, 0.05 % w/w 2H 3-(trimethylsilyl)propionic-2,2,3,3-d4 acid | 90% H2O/10% D2O | no salts | 7.00 | 1 atm | 298 | Bruker AVANCE 500 |
| 2 | 2D 1H-1H NOESY | 100 mM U-98% 2H deuterated sodium dodecyl sulphate, 2 mM temporin B, 0.05 % w/w 2H 3-(trimethylsilyl)propionic-2,2,3,3-d4 acid | 90% H2O/10% D2O | no salts | 7.00 | 1 atm | 298 | Bruker AVANCE 500 |
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | AVANCE | 500 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| simulated annealing | DYNAMO | |
| distance geometry | DYNAMO | |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | |
| Conformers Calculated Total Number | 200 |
| Conformers Submitted Total Number | 20 |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | refinement | DYNAMO | Delaglio and Kuszewski | |
| 2 | structure calculation | DYNAMO | Delaglio and Kuszewski | |
| 3 | chemical shift assignment | CARA | 1.9.1.2 | Keller and Wuthrich |
| 4 | processing | TopSpin | Bruker Biospin | |
| 5 | peak picking | NMRPipe | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax | |
