6GF2

The structure of the ubiquitin-like modifier FAT10 reveals a novel targeting mechanism for degradation by the 26S proteasome


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC2.0 mM [U-99% 13C; U-99% 15N] FAT10 C-domain, 20 mM sodium phosphate, 150 mM sodium chloride90% H2O/10% D2O0.2 M7.5ambient mbar298Bruker AVANCE III 600
22D 1H-13C HSQC2.0 mM [U-99% 13C; U-99% 15N] FAT10 C-domain, 20 mM sodium phosphate, 150 mM sodium chloride90% H2O/10% D2O0.2 M7.5ambient mbar298Bruker AVANCE III 600
33D HNCACB2.0 mM [U-99% 13C; U-99% 15N] FAT10 C-domain, 20 mM sodium phosphate, 150 mM sodium chloride90% H2O/10% D2O0.2 M7.5ambient mbar298Bruker AVANCE III 600
43D CBCA(CO)NH2.0 mM [U-99% 13C; U-99% 15N] FAT10 C-domain, 20 mM sodium phosphate, 150 mM sodium chloride90% H2O/10% D2O0.2 M7.5ambient mbar298Bruker AVANCE III 600
53D C(CO)NH2.0 mM [U-99% 13C; U-99% 15N] FAT10 C-domain, 20 mM sodium phosphate, 150 mM sodium chloride90% H2O/10% D2O0.2 M7.5ambient mbar298Bruker AVANCE III 600
83D HBHA(CO)NH2.0 mM [U-99% 13C; U-99% 15N] FAT10 C-domain, 20 mM sodium phosphate, 150 mM sodium chloride90% H2O/10% D2O0.2 M7.5ambient mbar298Bruker AVANCE III 600
73D H(CCO)NH2.0 mM [U-99% 13C; U-99% 15N] FAT10 C-domain, 20 mM sodium phosphate, 150 mM sodium chloride90% H2O/10% D2O0.2 M7.5ambient mbar298Bruker AVANCE III 600
63D HCCH-TOCSY2.0 mM [U-99% 13C; U-99% 15N] FAT10 C-domain, 20 mM sodium phosphate, 150 mM sodium chloride90% H2O/10% D2O0.2 M7.5ambient mbar298Bruker AVANCE III 600
132D 1H-1H NOESY2.0 mM [U-99% 13C; U-99% 15N] FAT10 C-domain, 20 mM sodium phosphate, 150 mM sodium chloride90% H2O/10% D2O0.2 M7.5ambient mbar298Bruker AVANCE III 800
123D 1H-15N NOESY2.0 mM [U-99% 13C; U-99% 15N] FAT10 C-domain, 20 mM sodium phosphate, 150 mM sodium chloride90% H2O/10% D2O0.2 M7.5ambient mbar298Bruker AVANCE III 800
113D 1H-13C NOESY2.0 mM [U-99% 13C; U-99% 15N] FAT10 C-domain, 20 mM sodium phosphate, 150 mM sodium chloride90% H2O/10% D2O0.2 M7.5ambient mbar298Bruker AVANCE III 800
103D 1H-13C-15N NOESY2.0 mM [U-99% 13C; U-99% 15N] FAT10 C-domain, 20 mM sodium phosphate, 150 mM sodium chloride90% H2O/10% D2O0.2 M7.5ambient mbar298Bruker AVANCE III 800
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE III600
2BrukerAVANCE III800
NMR Refinement
MethodDetailsSoftware
DGSA-distance geometry simulated annealingARIA
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number250
Conformers Submitted Total Number10
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementXEASYBartels et al.
2structure calculationARIA1.2Linge, O'Donoghue and Nilges
3chemical shift assignmentXEASYBartels et al.
4peak pickingXEASYBartels et al.