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Protein environment affects the water-tryptophan binding mode. Molecular dynamics simulations of Engrailed homeodomain mutants
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 2 2D 1H-1H NOESY 1 mM EnHD_K52E 90% H2O/10% D2O 150 mM 5.7 1 atm 298 Bruker AVANCE III 850
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE III 850
NMR Refinement Method Details Software simulated annealing
NMR Ensemble Information Conformer Selection Criteria three representative structures for the conformational equilibrium along the torsion angle N-CA-CB-CG of asparagine N51 Conformers Calculated Total Number 100 Conformers Submitted Total Number 3 Representative Model 1 (closest to the average)
Computation: NMR Software # Classification Version Software Name Author 4 refinement CNS Brunger, Adams, Clore, Gros, Nilges and Read 3 structure calculation CYANA Guntert, Mumenthaler and Wuthrich 1 chemical shift assignment Sparky Goddard 2 peak picking Sparky Goddard