6FGM
The NMR solution structure of the peptide AC12 from Hypsiboas raniceps
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 2D 1H-1H NOESY | 1.0 mM NA ac12 | 93% H2O/7% D2O | NA | 4.0 | AMBIENT atm | 298 | Bruker AVANCE III 700 |
| 2 | 2D 1H-1H TOCSY | 1.0 mM NA ac12 | 93% H2O/7% D2O | NA | 4.0 | AMBIENT atm | 298 | Bruker AVANCE III 700 |
| 3 | 2D 1H-1H ROESY | 1.0 mM NA ac12 | 93% H2O/7% D2O | NA | 4.0 | AMBIENT atm | 298 | Bruker AVANCE III 700 |
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | AVANCE III | 700 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| torsion angle dynamics | CYANA | |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | structures with the lowest energy |
| Conformers Calculated Total Number | 400 |
| Conformers Submitted Total Number | 20 |
| Representative Model | 1 (closest to the average) |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | structure calculation | CYANA | 3.0 | Guntert, P |
| 2 | collection | TopSpin | 3.0 | Bruker Biospin |
| 3 | peak picking | Sparky | NMRFAM-SPARKY 1.412 | Goddard TD & Kneller DG (2008) SPARKY 3. University of California, San Francisco. Bioinformatics. 2015 Apr 15; 31(8):1325-7. Epub 2014 Dec 12 NMRFAM-SPARKY: enhanced software for biomolecular NMR spectroscopy. |
| 4 | processing | TopSpin | 3.0 | Bruker Biospin |
