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Carboxypeptidase T mutant L254N with Sulphamoil Arginine
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 LIQUID DIFFUSION 296 SA 1.4%
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 157.81 α = 90 b = 157.81 β = 90 c = 103.94 γ = 120
Symmetry Space Group P 63 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS3 6M 2016-12-04 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SPRING-8 BEAMLINE BL41XU 0.85 SPring-8 BL41XU
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.79 29.82 99.65 0.11 4.5902 30.63 71613
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.79 1.89 97.86 0.31 2.4 9.44
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT 1.79 28.77 67962 3626 99.6 0.11608 0.11527 0.1159 0.13127 0.1312 RANDOM 17.32
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 30.11 r_sphericity_free 21.551 r_dihedral_angle_4_deg 16.575 r_dihedral_angle_3_deg 11.609 r_dihedral_angle_1_deg 6.533 r_sphericity_bonded 6.136 r_long_range_B_refined 2.387 r_rigid_bond_restr 2.14 r_long_range_B_other 2.106 r_scangle_other 1.767
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 30.11 r_sphericity_free 21.551 r_dihedral_angle_4_deg 16.575 r_dihedral_angle_3_deg 11.609 r_dihedral_angle_1_deg 6.533 r_sphericity_bonded 6.136 r_long_range_B_refined 2.387 r_rigid_bond_restr 2.14 r_long_range_B_other 2.106 r_scangle_other 1.767 r_scbond_it 1.6 r_scbond_other 1.587 r_angle_refined_deg 1.338 r_mcangle_it 1.303 r_mcangle_other 1.303 r_mcbond_it 1.024 r_mcbond_other 1.015 r_angle_other_deg 0.998 r_chiral_restr 0.086 r_bond_refined_d 0.008 r_gen_planes_refined 0.005 r_bond_other_d 0.002 r_gen_planes_other 0.002 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2581 Nucleic Acid Atoms Solvent Atoms 338 Heterogen Atoms 37
Software Software Software Name Purpose REFMAC refinement iMOSFLM data reduction SCALA data scaling PHASER phasing