6CZT

CS-rosetta determined structures of the N-terminal domain of AlgF from P. aeruginosa


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC50 mM potassium phosphate, 2 % v/v glycerol, 10 mM DTT90% H2O/10% D2O0.05 M6.81 atm298Varian INOVA 500
23D HNCACB50 mM potassium phosphate, 2 % v/v glycerol, 10 mM DTT90% H2O/10% D2O0.05 M6.81 atm298Varian INOVA 500
33D HNCO50 mM potassium phosphate, 2 % v/v glycerol, 10 mM DTT90% H2O/10% D2O0.05 M6.81 atm298Varian INOVA 500
43D HNCA50 mM potassium phosphate, 2 % v/v glycerol, 10 mM DTT90% H2O/10% D2O0.05 M6.81 atm298Varian INOVA 500
53D CBCA(CO)NH50 mM potassium phosphate, 2 % v/v glycerol, 10 mM DTT90% H2O/10% D2O0.05 M6.81 atm298Varian INOVA 500
83D HCCH-TOCSY50 mM potassium phosphate, 2 % v/v glycerol, 10 mM DTT90% H2O/10% D2O0.05 M6.81 atm298Varian INOVA 500
73D C(CO)NH50 mM potassium phosphate, 2 % v/v glycerol, 10 mM DTT90% H2O/10% D2O0.05 M6.81 atm298Varian INOVA 500
63D 1H-15N NOESY50 mM potassium phosphate, 2 % v/v glycerol, 10 mM DTT90% H2O/10% D2O0.05 M6.81 atm298Varian INOVA 800
93D 1H-13C NOESY aliphatic50 mM potassium phosphate, 2 % v/v glycerol, 10 mM DTT90% H2O/10% D2O0.05 M6.81 atm298Varian INOVA 800
103D 1H-13C NOESY aromatic50 mM potassium phosphate, 2 % v/v glycerol, 10 mM DTT90% H2O/10% D2O0.05 M6.81 atm298Varian INOVA 800
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA500
2VarianINOVA800
NMR Refinement
MethodDetailsSoftware
molecular dynamicsCS-ROSETTA
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number3000
Conformers Submitted Total Number10
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementCS-ROSETTAShen, Vernon, Baker and Bax
2chemical shift assignmentNMRViewJohnson, One Moon Scientific
3chemical shift assignmentCcpNMRCCPN
4processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
5structure calculationCS-ROSETTAShen, Vernon, Baker and Bax