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Solution structure of double knot toxin (DkTx)
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 300 uM [U-13C; U-15N] DkTx, 20 mM sodium phosphate, 10 uM DSS, 0.02 % w/v sodium azide 95% H2O/5% D2O 0 5.8 ambient 298 Bruker AVANCE III 900 2 3D HNCO 300 uM [U-13C; U-15N] DkTx, 20 mM sodium phosphate, 10 uM DSS, 0.02 % w/v sodium azide 95% H2O/5% D2O 0 5.8 ambient 298 Bruker AVANCE III 900 3 3D CBCA(CO)NH 300 uM [U-13C; U-15N] DkTx, 20 mM sodium phosphate, 10 uM DSS, 0.02 % w/v sodium azide 95% H2O/5% D2O 0 5.8 ambient 298 Bruker AVANCE III 900 4 3D HNCACB 300 uM [U-13C; U-15N] DkTx, 20 mM sodium phosphate, 10 uM DSS, 0.02 % w/v sodium azide 95% H2O/5% D2O 0 5.8 ambient 298 Bruker AVANCE III 900 5 3D HBHA(CO)NH 300 uM [U-13C; U-15N] DkTx, 20 mM sodium phosphate, 10 uM DSS, 0.02 % w/v sodium azide 95% H2O/5% D2O 0 5.8 ambient 298 Bruker AVANCE III 900 6 3D HCCH-TOCSY 300 uM [U-13C; U-15N] DkTx, 20 mM sodium phosphate, 10 uM DSS, 0.02 % w/v sodium azide 95% H2O/5% D2O 0 5.8 ambient 298 Bruker AVANCE III 900 7 3D 1H-13C NOESY aliphatic 300 uM [U-13C; U-15N] DkTx, 20 mM sodium phosphate, 10 uM DSS, 0.02 % w/v sodium azide 95% H2O/5% D2O 0 5.8 ambient 298 Bruker AVANCE III 900 8 3D 1H-13C NOESY aromatic 300 uM [U-13C; U-15N] DkTx, 20 mM sodium phosphate, 10 uM DSS, 0.02 % w/v sodium azide 95% H2O/5% D2O 0 5.8 ambient 298 Bruker AVANCE III 900 9 3D 1H-15N NOESY 300 uM [U-13C; U-15N] DkTx, 20 mM sodium phosphate, 10 uM DSS, 0.02 % w/v sodium azide 95% H2O/5% D2O 0 5.8 ambient 298 Bruker AVANCE III 900
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE III 900
NMR Refinement Method Details Software simulated annealing CYANA
NMR Ensemble Information Conformer Selection Criteria all calculated structures submitted Conformers Calculated Total Number 20 Conformers Submitted Total Number 20 Representative Model 1 (medoid)
Computation: NMR Software # Classification Version Software Name Author 1 refinement CYANA Guntert P. 2 data analysis CcpNMR CCPN 3 processing RNMRTK Hoch and Stern