☰ Navigation Tabs
Structure of the Rpn13-Rpn2 complex provides insights for Rpn13 and Uch37 as anticancer targets
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 0.7 mM [U-13C; U-15N] ADRM1, 0.7 mM [U-13C; U-15N] PSMD1 90% H2O/10% D2O 0.05 mM 6.5 ambient bar 298.2 Bruker AVANCE 850 2 3D HNCACB 0.7 mM [U-13C; U-15N] ADRM1, 0.7 mM [U-13C; U-15N] PSMD1 90% H2O/10% D2O 0.05 mM 6.5 ambient bar 298.2 Bruker AVANCE 800 3 3D CBCA(CO)NH 0.7 mM [U-13C; U-15N] ADRM1, 0.7 mM [U-13C; U-15N] PSMD1 90% H2O/10% D2O 0.05 mM 6.5 ambient bar 298.2 Bruker AVANCE 800 4 3D HNCO 0.7 mM [U-13C; U-15N] ADRM1, 0.7 mM [U-13C; U-15N] PSMD1 90% H2O/10% D2O 0.05 mM 6.5 ambient bar 298.2 Bruker AVANCE 600 5 3D HNCACO 0.7 mM [U-13C; U-15N] ADRM1, 0.7 mM [U-13C; U-15N] PSMD1 90% H2O/10% D2O 0.05 mM 6.5 ambient bar 298.2 Bruker AVANCE 600 6 3D 1H-15N NOESY 0.7 mM [U-13C; U-15N] ADRM1, 0.7 mM [U-13C; U-15N] PSMD1 90% H2O/10% D2O 0.05 mM 6.5 ambient bar 298.2 Bruker AVANCE 850 7 3D 1H-13C NOESY 0.7 mM [U-13C; U-15N] ADRM1, 0.7 mM [U-13C; U-15N] PSMD1 90% H2O/10% D2O 0.05 mM 6.5 ambient bar 298.2 Bruker AVANCE 850 8 3D half-filtered 1H-13C NOESY 0.7 mM [U-13C; U-15N] ADRM1, 0.7 mM [U-13C; U-15N] PSMD1 90% H2O/10% D2O 0.05 mM 6.5 ambient bar 298.2 Bruker AVANCE 700 9 2D 1H-13C HSQC aliphatic 0.7 mM [U-13C; U-15N] ADRM1, 0.7 mM [U-13C; U-15N] PSMD1 90% H2O/10% D2O 0.05 mM 6.5 ambient bar 298.2 Bruker AVANCE 850
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 600 2 Bruker AVANCE 700 4 Bruker AVANCE 800 3 Bruker AVANCE 850
NMR Refinement Method Details Software simulated annealing X-PLOR NIH
NMR Ensemble Information Conformer Selection Criteria structures with the least restraint violations Conformers Calculated Total Number 100 Conformers Submitted Total Number 15 Representative Model 1 (target function)
Computation: NMR Software # Classification Version Software Name Author 1 chemical shift assignment XEASY Bartels et al. 2 data analysis XEASY Bartels et al. 3 peak picking XEASY Bartels et al. 4 processing NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 5 refinement X-PLOR NIH Schwieters, Kuszewski, Tjandra and Clore 6 collection TopSpin Bruker Biospin 7 data analysis TALOS Cornilescu, Delaglio and Bax 8 data analysis ProcheckNMR Laskowski and MacArthur