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Structure of the DASH/Dam1 complex shows its role at the yeast kinetochore-microtubule interface
Refinement RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 7.898 f_angle_d 1.118 f_chiral_restr 0.053 f_plane_restr 0.008 f_bond_d 0.007
Specimen Preparation Sample Aggregation State HELICAL ARRAY Vitrification Instrument GATAN CRYOPLUNGE 3 Cryogen Name ETHANE Sample Vitrification Details
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 34997 Reported Resolution (Å) 4.5 Resolution Method FSC 0.143 CUT-OFF Other Details Refinement Type Symmetry Type POINT Point Symmetry C1
Map-Model Fitting and Refinement Id 1 Refinement Space REAL Refinement Protocol AB INITIO MODEL Refinement Target CC Overall B Value 240 Fitting Procedure Details phenix.real_space_refine
Data Acquisition Detector Type GATAN K2 SUMMIT (4k x 4k) Electron Dose (electrons/Å**2) 1.115
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model FEI TITAN KRIOS Minimum Defocus (nm) 1200 Maximum Defocus (nm) 2400 Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS 2.7 Imaging Mode BRIGHT FIELD Specimen Holder Model FEI TITAN KRIOS AUTOGRID HOLDER Nominal Magnification Calibrated Magnification 30488 Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details
EM Software Task Software Package Version PARTICLE SELECTION EMAN2 2.1 IMAGE ACQUISITION SerialEM CTF CORRECTION Gctf 1.06 MODEL FITTING PHENIX MODEL FITTING O INITIAL EULER ASSIGNMENT SPARX INITIAL EULER ASSIGNMENT EMAN2 FINAL EULER ASSIGNMENT cisTEM RECONSTRUCTION cisTEM MODEL REFINEMENT Rosetta MODEL REFINEMENT PHENIX 1.12
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details PHASE FLIPPING AND AMPLITUDE CORRECTION 34997