6BV7

NMR structure of Sodium/Calcium Exchanger 1 (NCX1) Two-helix Bundle (THB) domain


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC300 uM [U-15N] NCX1_THB, 100 mM sodium chloride, 20 mM sodium phosphate90% H2O/10% D2O100 mM NaCl, 20 mM Sodium Phosphate mM7.01 atm298Bruker AVANCE III 850
22D 1H-13C HSQC300 uM [U-13C; U-15N] NCX1 THB, 100 mM sodium chloride, 20 mM sodium phosphate100% D2O100 mM NaCl, 20 mM Sodium Phosphate mM7.01 atm298Bruker AVANCE III 850
33D HNCA300 uM [U-13C; U-15N] NCX1 THB, 100 mM sodium chloride, 20 mM sodium phosphate90% H2O/10% D2O100 mM NaCl, 20 mM Sodium Phosphate mM7.01 atm298Bruker AVANCE III 700
43D HN(CO)CA300 uM [U-13C; U-15N] NCX1 THB, 100 mM sodium chloride, 20 mM sodium phosphate90% H2O/10% D2O100 mM NaCl, 20 mM Sodium Phosphate mM7.01 atm298Bruker AVANCE III 700
53D HNCO300 uM [U-13C; U-15N] NCX1 THB, 100 mM sodium chloride, 20 mM sodium phosphate90% H2O/10% D2O100 mM NaCl, 20 mM Sodium Phosphate mM7.01 atm298Bruker AVANCE III 700
63D HNCACO300 uM [U-13C; U-15N] NCX1 THB, 100 mM sodium chloride, 20 mM sodium phosphate90% H2O/10% D2O100 mM NaCl, 20 mM Sodium Phosphate mM7.01 atm298Bruker AVANCE III 700
73D HNCACB300 uM [U-13C; U-15N] NCX1 THB, 100 mM sodium chloride, 20 mM sodium phosphate90% H2O/10% D2O100 mM NaCl, 20 mM Sodium Phosphate mM7.01 atm298Bruker AVANCE III 700
83D HN(COCA)CB300 uM [U-13C; U-15N] NCX1 THB, 100 mM sodium chloride, 20 mM sodium phosphate90% H2O/10% D2O100 mM NaCl, 20 mM Sodium Phosphate mM7.01 atm298Bruker AVANCE III 700
93D HCCH-TOCSY300 uM [U-13C; U-15N] NCX1 THB, 100 mM sodium chloride, 20 mM sodium phosphate100% D2O100 mM NaCl, 20 mM Sodium Phosphate mM7.01 atm298Bruker AVANCE III 700
103D HCCH-TOCSY300 uM [U-13C; U-15N] NCX1 THB, 100 mM sodium chloride, 20 mM sodium phosphate100% D2O100 mM NaCl, 20 mM Sodium Phosphate mM7.01 atm298Bruker AVANCE III 700
113D H(CO)NH-TOCSY300 uM [U-13C; U-15N] NCX1 THB, 100 mM sodium chloride, 20 mM sodium phosphate90% H2O/10% D2O100 mM NaCl, 20 mM Sodium Phosphate mM7.01 atm298Bruker AVANCE III 700
123D (H)CC(CO)NH-TOCSY300 uM [U-13C; U-15N] NCX1 THB, 100 mM sodium chloride, 20 mM sodium phosphate90% H2O/10% D2O100 mM NaCl, 20 mM Sodium Phosphate mM7.01 atm298Bruker AVANCE III 700
132D aromatic TROSY-HSQC300 uM [U-13C; U-15N] NCX1 THB, 100 mM sodium chloride, 20 mM sodium phosphate100% D2O100 mM NaCl, 20 mM Sodium Phosphate mM7.01 atm298Bruker AVANCE III 700
142D 1H-1H NOESY300 uM NCX1 THB, 100 mM sodium chloride, 20 mM sodium phosphate100% D2O100 mM NaCl, 20 mM Sodium Phosphate mM7.01 atm298Bruker AVANCE III 700
153D HNHB300 uM [U-15N] NCX1_THB, 100 mM sodium chloride, 20 mM sodium phosphate90% H2O/10% D2O100 mM NaCl, 20 mM Sodium Phosphate mM7.01 atm298Bruker AVANCE III 700
162D DQF-COSY300 uM NCX1 THB, 100 mM sodium chloride, 20 mM sodium phosphate100% D2O100 mM NaCl, 20 mM Sodium Phosphate mM7.01 atm298Bruker AVANCE III 700
172D 10%-13C CT-HSQC300 uM [U-10% 13C] NCX1 THB, 100 mM sodium chloride, 20 mM sodium phosphate100% D2O100 mM NaCl, 20 mM Sodium Phosphate mM7.01 atm298Bruker AVANCE III 700
183D 15N-edited NOESY300 uM [U-13C; U-15N] NCX1 THB, 100 mM sodium chloride, 20 mM sodium phosphate90% H2O/10% D2O100 mM NaCl, 20 mM Sodium Phosphate mM7.01 atm298Bruker AVANCE III 850
193D 15N-edited CNH-NOESY300 uM [U-13C; U-15N] NCX1 THB, 100 mM sodium chloride, 20 mM sodium phosphate90% H2O/10% D2O100 mM NaCl, 20 mM Sodium Phosphate mM7.01 atm298Bruker AVANCE III 850
203D 13C-edited NOESY300 uM [U-13C; U-15N] NCX1 THB, 100 mM sodium chloride, 20 mM sodium phosphate100% D2O100 mM NaCl, 20 mM Sodium Phosphate mM7.01 atm298Bruker AVANCE III 850
213D 13C-edited CCH-NOESY300 uM [U-13C; U-15N] NCX1 THB, 100 mM sodium chloride, 20 mM sodium phosphate100% D2O100 mM NaCl, 20 mM Sodium Phosphate mM7.01 atm298Bruker AVANCE III 850
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE III850
2BrukerAVANCE III700
NMR Refinement
MethodDetailsSoftware
simulated annealingCNS
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (closest to the average)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
2data analysisNMRDrawDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
3data analysisSparkyGoddard
5data analysisNMRViewJohnson, One Moon Scientific
4refinementCNSBrunger, Adams, Clore, Gros, Nilges and Read
6structure calculationCNSBrunger, Adams, Clore, Gros, Nilges and Read