☰ Navigation Tabs
CYP154C4 from Streptomyces sp. W2061
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 293 25% (w/v) PEG3350, 0.2 M lithium sulfate, and 0.1 M Bis-Tris:HCl pH 6.5
Crystal Properties Matthews coefficient Solvent content 3.44 64.22
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 83.755 α = 90 b = 115.032 β = 90 c = 127.807 γ = 90
Symmetry Space Group I 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 200 CCD ADSC QUANTUM 315r 2017-05-28 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON PAL/PLS BEAMLINE 5C (4A) 0.9795 PAL/PLS 5C (4A)
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.19 50 98 0.087 42.9 6.5 31349
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.19 2.24 0.445
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT 2.19 46.47 29794 1554 97.75 0.17537 0.17293 0.1821 0.22234 0.2282 RANDOM 43.103
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.01 -0.01
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.953 r_dihedral_angle_4_deg 17.214 r_dihedral_angle_3_deg 15.607 r_long_range_B_other 10.523 r_long_range_B_refined 10.512 r_scangle_other 8.332 r_dihedral_angle_1_deg 6.52 r_mcangle_it 5.816 r_mcangle_other 5.815 r_scbond_other 5.595
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.953 r_dihedral_angle_4_deg 17.214 r_dihedral_angle_3_deg 15.607 r_long_range_B_other 10.523 r_long_range_B_refined 10.512 r_scangle_other 8.332 r_dihedral_angle_1_deg 6.52 r_mcangle_it 5.816 r_mcangle_other 5.815 r_scbond_other 5.595 r_scbond_it 5.591 r_mcbond_it 4.156 r_mcbond_other 4.078 r_angle_refined_deg 2.002 r_angle_other_deg 1.129 r_chiral_restr 0.126 r_bond_refined_d 0.019 r_gen_planes_refined 0.011 r_gen_planes_other 0.005 r_bond_other_d 0.002 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3137 Nucleic Acid Atoms Solvent Atoms 268 Heterogen Atoms 43
Software Software Software Name Purpose REFMAC refinement MxDC data collection HKL-2000 data scaling