6A7I

CYP154C4 from Streptomyces sp. W2061


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP29325% (w/v) PEG3350, 0.2 M lithium sulfate, and 0.1 M Bis-Tris:HCl pH 6.5
Crystal Properties
Matthews coefficientSolvent content
3.4464.22

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 83.755α = 90
b = 115.032β = 90
c = 127.807γ = 90
Symmetry
Space GroupI 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray200CCDADSC QUANTUM 315r2017-05-28MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONPAL/PLS BEAMLINE 5C (4A)0.9795PAL/PLS5C (4A)

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.1950980.08742.96.531349
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.192.240.445

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONTHROUGHOUT2.1946.4729794155497.750.175370.172930.22234RANDOM43.103
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.01-0.01
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg35.953
r_dihedral_angle_4_deg17.214
r_dihedral_angle_3_deg15.607
r_long_range_B_other10.523
r_long_range_B_refined10.512
r_scangle_other8.332
r_dihedral_angle_1_deg6.52
r_mcangle_it5.816
r_mcangle_other5.815
r_scbond_other5.595
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg35.953
r_dihedral_angle_4_deg17.214
r_dihedral_angle_3_deg15.607
r_long_range_B_other10.523
r_long_range_B_refined10.512
r_scangle_other8.332
r_dihedral_angle_1_deg6.52
r_mcangle_it5.816
r_mcangle_other5.815
r_scbond_other5.595
r_scbond_it5.591
r_mcbond_it4.156
r_mcbond_other4.078
r_angle_refined_deg2.002
r_angle_other_deg1.129
r_chiral_restr0.126
r_bond_refined_d0.019
r_gen_planes_refined0.011
r_gen_planes_other0.005
r_bond_other_d0.002
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_scangle_it
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms3137
Nucleic Acid Atoms
Solvent Atoms268
Heterogen Atoms43

Software

Software
Software NamePurpose
REFMACrefinement
MxDCdata collection
HKL-2000data scaling