X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP291PACT condition C6: 0.1M PCTP Buffer, pH 9.0, 25% PEG 1500
Crystal Properties
Matthews coefficientSolvent content
2.3547.57

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 96.7α = 90
b = 98.02β = 90
c = 102.64γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100PIXELDECTRIS PILATUS3 S 6M2016-07-07MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONDIAMOND BEAMLINE I020.979DiamondI02

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.2857.1799.917.77.2249821

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT5BT01.2857.172374881222899.910.174950.174110.19102RANDOM23.899
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.671.44-0.77
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg31.996
r_dihedral_angle_3_deg12.315
r_dihedral_angle_4_deg10.759
r_dihedral_angle_1_deg5.71
r_long_range_B_refined4.895
r_long_range_B_other4.892
r_scangle_other2.484
r_angle_refined_deg2.264
r_scbond_it1.725
r_scbond_other1.718
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg31.996
r_dihedral_angle_3_deg12.315
r_dihedral_angle_4_deg10.759
r_dihedral_angle_1_deg5.71
r_long_range_B_refined4.895
r_long_range_B_other4.892
r_scangle_other2.484
r_angle_refined_deg2.264
r_scbond_it1.725
r_scbond_other1.718
r_angle_other_deg1.146
r_mcangle_it1.101
r_mcangle_other1.101
r_mcbond_it0.675
r_mcbond_other0.675
r_chiral_restr0.145
r_bond_refined_d0.026
r_gen_planes_refined0.013
r_bond_other_d0.003
r_gen_planes_other0.002
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_scangle_it
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms7250
Nucleic Acid Atoms
Solvent Atoms975
Heterogen Atoms69

Software

Software
Software NamePurpose
REFMACrefinement
XDSdata reduction
Aimlessdata scaling
PHASERphasing