SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-1H NOESY1.0 mg/mL DNA (5'-D(*GP*GP*(FT)P*TP*GP*GP*TP*GP*TP*GP*GP*TP*TP*GP*G)-3')90% H2O/10% D2O10mM NaPi, 25mM KCl mM7.01 atm279.6Bruker AVANCE 800
22D DQF-COSY1.0 mg/mL DNA (5'-D(*GP*GP*(FT)P*TP*GP*GP*TP*GP*TP*GP*GP*TP*TP*GP*G)-3')90% H2O/10% D2O10mM NaPi, 25mM KCl mM7.01 atm279.6Bruker AVANCE 600
32D 1H-1H TOCSY1.0 mg/mL DNA (5'-D(*GP*GP*(FT)P*TP*GP*GP*TP*GP*TP*GP*GP*TP*TP*GP*G)-3')90% H2O/10% D2O10mM NaPi, 25mM KCl mM7.01 atm279.6Bruker AVANCE 600
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE800
2BrukerAVANCE600
NMR Refinement
MethodDetailsSoftware
molecular dynamicsAmber
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number15
Conformers Submitted Total Number10
Representative Model10 (minimized average structure)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementAmberCase, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman
2structure calculationDYANAGuntert, Braun and Wuthrich
3chemical shift assignmentSparkyGoddard
4peak pickingSparkyGoddard