5KZO

Notch1 transmembrane and associated juxtamembrane segment


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC350 uM [U-99% 15N] Notch1, 150 mg/mL DHPC/DMPC bicelle, 1 mM EDTA, 65 mM imidazole, 2 mM DTT90% H2O/10% D2O65 mM imidazole mM5.51 atm318Bruker AVANCE III 900
23D C(CO)NH500 uM [U-99% 13C; U-99% 15N] Notch1, 150 mg/mL DHPC/DMPC, 1 mM EDTA, 65 mM imidazole, 2 mM DTT90% H2O/10% D2O65 mM imidazole mM5.51 atm318Bruker AVANCE III 600
33D H(CCO)NH500 uM [U-99% 13C; U-99% 15N] Notch1, 150 mg/mL DHPC/DMPC, 1 mM EDTA, 65 mM imidazole, 2 mM DTT90% H2O/10% D2O65 mM imidazole mM5.51 atm318Bruker AVANCE III 600
43D HCCH-TOCSY500 uM [U-99% 13C; U-99% 15N] Notch1, 150 mg/mL DHPC/DMPC bicelle100% D2O65 mM imidazole mM5.51 atm318Bruker AVANCE III 600
53D 1H-15N NOESY350 uM [U-99% 15N] Notch1, 150 mg/mL DHPC/DMPC bicelle, 1 mM EDTA, 65 mM imidazole, 2 mM DTT90% H2O/10% D2O65 mM imidazole mM5.51 atm318Bruker AVANCE III 900
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE III900
2BrukerAVANCE III600
NMR Refinement
MethodDetailsSoftware
simulated annealingX-PLOR
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number2000
Conformers Submitted Total Number10
Representative Model1 (closest to the average)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1chemical shift assignmentSparkyGoddard
2chemical shift calculationTALOSCornilescu, Delaglio and Bax
3refinementX-PLORBrunger
4peak pickingSparkyGoddard