☰ Navigation Tabs
Solution structure of Tilapia Piscidin 4 (TP4) from Oreochromis niloticus
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-1H TOCSY 1.5 mM TP4, 20 mM sodium phosphate, 100 mM U-98% 2H dodecylphosphocholine 90% H2O/10% D2O 105 mM 3.5 ATMOSPHERIC atm 318 Bruker AVANCE 600 2 2D 1H-1H COSY 1.5 mM TP4, 20 mM sodium phosphate, 100 mM U-98% 2H dodecylphosphocholine 90% H2O/10% D2O 105 mM 3.5 ATMOSPHERIC atm 318 Bruker AVANCE 600 3 2D 1H-1H NOESY 1.5 mM TP4, 20 mM sodium phosphate, 100 mM U-98% 2H dodecylphosphocholine 90% H2O/10% D2O 105 mM 3.5 ATMOSPHERIC atm 318 Bruker AVANCE 600 4 2D DQF-COSY 1.5 mM TP4, 20 mM sodium phosphate, 100 mM U-98% 2H dodecylphosphocholine 90% H2O/10% D2O 105 mM 3.5 ATMOSPHERIC atm 318 Bruker AVANCE 600 5 2D 1H-1H NOESY 1.5 mM TP4, 20 mM sodium phosphate, 100 mM U-98% 2H dodecylphosphocholine 100% D2O 105 mM 3.5 ATMOSPHERIC atm 318 Bruker AVANCE 600 6 2D 1H-1H TOCSY 1.5 mM TP4, 20 mM sodium phosphate, 100 mM U-98% 2H dodecylphosphocholine 100% D2O 105 mM 3.5 ATMOSPHERIC atm 318 Bruker AVANCE 600
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 600
NMR Refinement Method Details Software simulated annealing X-PLOR NIH
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 200 Conformers Submitted Total Number 15 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 chemical shift assignment Bruker TopSpin 3.1 Bruker 2 data analysis Sparky Goddard 3 structure calculation X-PLOR NIH Schwieters, Kuszewski, Tjandra and Clore 4 refinement X-PLOR NIH Schwieters, Kuszewski, Tjandra and Clore