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Crystal Structure of the Human Sterol Transporter ABCG5/ABCG8
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 293 Bicelle, ammonium sulfate, PEG 400, MES, TCEP
Crystal Properties Matthews coefficient Solvent content 4.08 69.83
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 173.552 α = 90 b = 224.804 β = 90 c = 253.304 γ = 90
Symmetry Space Group I 2 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 80 CCD ADSC QUANTUM 315r 2013-11-26 M SINGLE WAVELENGTH 2 1 x-ray 80 CCD MARMOSAIC 300 mm CCD 2013-10-18 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 19-ID 1.0 APS 19-ID 2 SYNCHROTRON APS BEAMLINE 23-ID-D 1.0 APS 23-ID-D
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 3.9 50 99.4 8.8 18.9 46342
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 3.93 25 34889 1845 82.47 0.24951 0.24532 0.2502 0.32871 0.327 RANDOM 70.196
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.55 -3.4 1.86
RMS Deviations Key Refinement Restraint Deviation r_long_range_B_refined 56.377 r_long_range_B_other 56.377 r_scangle_other 48.153 r_mcangle_it 42.062 r_mcangle_other 42.061 r_scbond_it 33.893 r_scbond_other 33.891 r_dihedral_angle_2_deg 33.839 r_mcbond_it 28.686 r_mcbond_other 28.667
RMS Deviations Key Refinement Restraint Deviation r_long_range_B_refined 56.377 r_long_range_B_other 56.377 r_scangle_other 48.153 r_mcangle_it 42.062 r_mcangle_other 42.061 r_scbond_it 33.893 r_scbond_other 33.891 r_dihedral_angle_2_deg 33.839 r_mcbond_it 28.686 r_mcbond_other 28.667 r_dihedral_angle_3_deg 19.664 r_dihedral_angle_4_deg 16.841 r_dihedral_angle_1_deg 8.986 r_angle_refined_deg 1.642 r_angle_other_deg 1.178 r_chiral_restr 0.092 r_bond_refined_d 0.01 r_gen_planes_refined 0.008 r_bond_other_d 0.004 r_gen_planes_other 0.003 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 18151 Nucleic Acid Atoms Solvent Atoms Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement HKL-3000 data reduction HKL-3000 data scaling MLPHARE phasing