5ZR0

Solution structure of peptidyl-prolyl cis/trans isomerase domain of Trigger Factor in complex with MBP

SOLUTION NMR

NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-15N HSQC	1 mM [U-99% 13C; U-99% 15N] MBP238-266-PPD fusion	90% H2O/10% D2O	100 mM	7.0	1 atm	295	Varian UNITY 800
2	2D 1H-13C HSQC aliphatic	1 mM [U-99% 13C; U-99% 15N] MBP238-266-PPD fusion	90% H2O/10% D2O	100 mM	7.0	1 atm	295	Varian UNITY 800
3	2D 1H-13C HSQC aromatic	1 mM [U-99% 13C; U-99% 15N] MBP238-266-PPD fusion	90% H2O/10% D2O	100 mM	7.0	1 atm	295	Varian UNITY 800
4	3D HNCA	1 mM [U-99% 13C; U-99% 15N] MBP238-266-PPD fusion	90% H2O/10% D2O	100 mM	7.0	1 atm	295	Varian UNITY 600
5	3D HNCACB	1 mM [U-99% 13C; U-99% 15N] MBP238-266-PPD fusion	90% H2O/10% D2O	100 mM	7.0	1 atm	295	Varian UNITY 600
6	3D HNCO	1 mM [U-99% 13C; U-99% 15N] MBP238-266-PPD fusion	90% H2O/10% D2O	100 mM	7.0	1 atm	295	Varian UNITY 600
7	3D HN(CO)CA	1 mM [U-99% 13C; U-99% 15N] MBP238-266-PPD fusion	90% H2O/10% D2O	100 mM	7.0	1 atm	295	Varian UNITY 600
8	3D CBCA(CO)NH	1 mM [U-99% 13C; U-99% 15N] MBP238-266-PPD fusion	90% H2O/10% D2O	100 mM	7.0	1 atm	295	Varian UNITY 600
9	3D HNCAHA	1 mM [U-99% 13C; U-99% 15N] MBP238-266-PPD fusion	90% H2O/10% D2O	100 mM	7.0	1 atm	295	Varian UNITY 600
10	3D HBHA(CO)NH	1 mM [U-99% 13C; U-99% 15N] MBP238-266-PPD fusion	90% H2O/10% D2O	100 mM	7.0	1 atm	295	Varian UNITY 600
11	3D HCCH-TOCSY	1 mM [U-99% 13C; U-99% 15N] MBP238-266-PPD fusion	90% H2O/10% D2O	100 mM	7.0	1 atm	295	Varian UNITY 800
12	3D HCCH-TOCSY	1 mM [U-99% 13C; U-99% 15N] MBP238-266-PPD fusion	90% H2O/10% D2O	100 mM	7.0	1 atm	295	Varian UNITY 800
13	2D HBCBCGCDHD	1 mM [U-99% 13C; U-99% 15N] MBP238-266-PPD fusion	90% H2O/10% D2O	100 mM	7.0	1 atm	295	Varian UNITY 600
14	2D HBCBCGCDCEHE	1 mM [U-99% 13C; U-99% 15N] MBP238-266-PPD fusion	90% H2O/10% D2O	100 mM	7.0	1 atm	295	Varian UNITY 600
15	3D 1H-15N NOESY	1 mM [U-99% 13C; U-99% 15N] MBP238-266-PPD fusion	90% H2O/10% D2O	100 mM	7.0	1 atm	295	Varian UNITY 800
16	3D 1H-13C NOESY aliphatic	1 mM [U-99% 13C; U-99% 15N] MBP238-266-PPD fusion	90% H2O/10% D2O	100 mM	7.0	1 atm	295	Varian UNITY 800
17	3D 1H-13C NOESY aromatic	1 mM [U-99% 13C; U-99% 15N] MBP238-266-PPD fusion	90% H2O/10% D2O	100 mM	7.0	1 atm	295	Varian UNITY 800

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Varian	UNITY	800
2	Varian	UNITY	600

NMR Refinement
Method	Details	Software
molecular dynamics		CNS

NMR Ensemble Information
Conformer Selection Criteria	target function
Conformers Calculated Total Number	100
Conformers Submitted Total Number	20
Representative Model	1 (target function)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	data analysis	Olivia		Masashi Yokochi
2	structure calculation	CYANA		Guntert, Mumenthaler and Wuthrich
3	chemical shift assignment	Olivia		Masashi Yokochi
4	refinement	CNS		Brunger, Adams, Clore, Gros, Nilges and Read
5	processing	NMRPipe		Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.