5ZCZ | pdb_00005zcz

Solution structure of the T. Thermophilus HB8 TTHA1718 protein in living eukaryotic cells by in-cell NMR spectroscopy

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-15N SOFAST-HMQC	50 uM [U-100% 13C; U-100% 15N] thermophilus HB8 TTHA1718 gene product 1, 50 uM [U-100% 15N] thermophilus HB8 TTHA1718 gene product 2	90% H2O/10% D2O	0	0	AMBIENT atm	300	Bruker AVANCE III 600
2	2D 1H-13C HSQC	50 uM [U-100% 13C; U-100% 15N] thermophilus HB8 TTHA1718 gene product 1, 50 uM [U-100% 15N] thermophilus HB8 TTHA1718 gene product 2	90% H2O/10% D2O	0	0	AMBIENT atm	300	Bruker AVANCE III 600
3	3D 1H-15N NOESY	50 uM [U-100% 13C; U-100% 15N] thermophilus HB8 TTHA1718 gene product 1, 50 uM [U-100% 15N] thermophilus HB8 TTHA1718 gene product 2	90% H2O/10% D2O	0	0	AMBIENT atm	300	Bruker AVANCE III 600
4	3D 1H-13C NOESY	50 uM [U-100% 13C; U-100% 15N] thermophilus HB8 TTHA1718 gene product 1, 50 uM [U-100% 15N] thermophilus HB8 TTHA1718 gene product 2	90% H2O/10% D2O	0	0	AMBIENT atm	300	Bruker AVANCE III 600

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	AVANCE III	600

NMR Refinement
Method	Details	Software
energy minimization		OPAL

NMR Ensemble Information
Conformer Selection Criteria	structures with the least restraint violations
Conformers Calculated Total Number	1000
Conformers Submitted Total Number	20
Representative Model	1 (target function)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	refinement	OPAL	1.4	Luginbuhl, Guntert, Billeter and Wuthrich
2	processing	Azara	2.8.1	Boucher
3	structure calculation	CYANA	3.98	Guntert, Mumenthaler and Wuthrich
4	chemical shift assignment	CcpNmr Analysis	2.4.2	CCPN
5	peak picking	CcpNmr Analysis	2.4.2	CCPN