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NMR Solution Structure of the Kringle domain of human receptor tyrosine kinase-like orphan receptor 1 (ROR1)
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 HBHA(CO)NH 0.8 mM 99%U-13C, U-15N ROR1Kr 94% H2O/6% D2O 150 mM 8.0 1 atm 298 Bruker AVANCE III 600 2 H(CCO)NH 0.8 mM 99%U-13C, U-15N ROR1Kr 94% H2O/6% D2O 150 mM 8.0 1 atm 298 Bruker AVANCE III 600 3 C(CO)NH 0.8 mM 99%U-13C, U-15N ROR1Kr 94% H2O/6% D2O 150 mM 8.0 1 atm 298 Bruker AVANCE III 600 4 CBCA (CO) NH 0.8 mM 99%U-13C, U-15N ROR1Kr 94% H2O/6% D2O 150 mM 8.0 1 atm 298 Bruker AVANCE III 600 5 (Hali)CaliCaroHaro-TOCSY 0.8 mM 99%U-13C, U-15N ROR1Kr 94% H2O/6% D2O 150 mM 8.0 1 atm 298 Bruker AVANCE III 600 6 HNCA 0.8 mM 99%U-13C, U-15N ROR1Kr 94% H2O/6% D2O 150 mM 8.0 1 atm 298 Bruker AVANCE III 800 15 3D HNCACB 0.8 mM 99%U-13C, U-15N ROR1Kr 94% H2O/6% D2O 150 mM 8.0 1 atm 298 Bruker AVANCE III 800 14 3D HNCO 0.8 mM 99%U-13C, U-15N ROR1Kr 94% H2O/6% D2O 150 mM 8.0 1 atm 298 Bruker AVANCE III 800 13 3D HCCH-TOCSY 0.8 mM 99%U-13C, U-15N ROR1Kr 94% H2O/6% D2O 150 mM 8.0 1 atm 298 Bruker AVANCE III 800 12 3D CCH-TOCSY 0.8 mM 99%U-13C, U-15N ROR1Kr 94% H2O/6% D2O 150 mM 8.0 1 atm 298 Bruker AVANCE III 800 11 2D 1H-15N HSQC 0.8 mM 99%U-13C, U-15N ROR1Kr 94% H2O/6% D2O 150 mM 8.0 1 atm 298 Bruker AVANCE III 800 10 2D 1H-13C CT-HSQC 0.8 mM 99%U-13C, U-15N ROR1Kr 94% H2O/6% D2O 150 mM 8.0 1 atm 298 Bruker AVANCE III 800 9 3D 1H-15N NOESY 0.8 mM 99%U-13C, U-15N ROR1Kr 94% H2O/6% D2O 150 mM 8.0 1 atm 298 Bruker AVANCE III 800 8 3D 1H-13C NOESY aliphatic 0.8 mM 99%U-13C, U-15N ROR1Kr 94% H2O/6% D2O 150 mM 8.0 1 atm 298 Bruker AVANCE III 800 7 3D 1H-13C NOESY aromatic 0.8 mM 99%U-13C, U-15N ROR1Kr 94% H2O/6% D2O 150 mM 8.0 1 atm 298 Bruker AVANCE III 800
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE III 600 2 Bruker AVANCE III 800
NMR Refinement Method Details Software torsion angle dynamics X-PLOR NIH
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 96 Conformers Submitted Total Number 10 Representative Model 1 (medoid)
Computation: NMR Software # Classification Version Software Name Author 2 collection TopSpin Bruker Biospin 3 processing NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 5 peak picking Sparky Goddard 1 chemical shift assignment PINE Bahrami, Markley, Assadi, and Eghbalnia 4 data analysis Sparky Goddard 6 structure calculation X-PLOR NIH Schwieters, Kuszewski, Tjandra and Clore