5Y70
NMR structure of KMP11 in DPC micelle
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D 1H-15N TOCSY | 500 uM [U-99% 13C; U-99% 15N] KMP-11, 150 mM DPC | 90% H2O/10% D2O | 200 mM | 6.5 | 1 Pa | 313 | Bruker AVANCE 800 |
2 | 3D 1H-15N NOESY | 500 uM [U-99% 13C; U-99% 15N] KMP-11, 150 mM DPC | 90% H2O/10% D2O | 200 mM | 6.5 | 1 Pa | 313 | Bruker AVANCE 800 |
3 | 3D CBCA(CO)NH | 500 uM [U-99% 13C; U-99% 15N] KMP-11, 150 mM DPC | 90% H2O/10% D2O | 200 mM | 6.5 | 1 Pa | 313 | Bruker AVANCE 800 |
4 | 3D HNCACB | 500 uM [U-99% 13C; U-99% 15N] KMP-11, 150 mM DPC | 90% H2O/10% D2O | 200 mM | 6.5 | 1 Pa | 313 | Bruker AVANCE 800 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 800 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
molecular dynamics | Amber |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | target function |
Conformers Calculated Total Number | 50 |
Conformers Submitted Total Number | 15 |
Representative Model | 1 (target function) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | chemical shift assignment | CcpNMR | 2.4.1 | CCPN |
2 | structure calculation | CYANA | 2 | Guntert, Mumenthaler and Wuthrich |
3 | refinement | Amber | 10 | Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman |