5XV8 | pdb_00005xv8

Solution structure of the complex between UVSSA acidic region and TFIIH p62 PH domain

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-15N HSQC	0.40 mM [U-99% 13C; U-99% 15N] UVSSA, 0.48 mM TFIIH p62	90% H2O/10% D2O	20 mM	6.80	760 mmHg	305	Bruker AVANCE III 950
2	3D CBCA(CO)NH	0.40 mM [U-99% 13C; U-99% 15N] UVSSA, 0.48 mM TFIIH p62	90% H2O/10% D2O	20 mM	6.80	760 mmHg	305	Bruker AVANCE III 600
3	3D HNCO	0.40 mM [U-99% 13C; U-99% 15N] UVSSA, 0.48 mM TFIIH p62	90% H2O/10% D2O	20 mM	6.80	760 mmHg	305	Bruker AVANCE III 600
4	3D HBHA(CO)NH	0.40 mM [U-99% 13C; U-99% 15N] UVSSA, 0.48 mM TFIIH p62	90% H2O/10% D2O	20 mM	6.80	760 mmHg	305	Bruker AVANCE III 600
5	3D C(CO)NH	0.40 mM [U-99% 13C; U-99% 15N] UVSSA, 0.48 mM TFIIH p62	90% H2O/10% D2O	20 mM	6.80	760 mmHg	305	Bruker AVANCE III 600
6	3D H(CCO)NH	0.40 mM [U-99% 13C; U-99% 15N] UVSSA, 0.48 mM TFIIH p62	90% H2O/10% D2O	20 mM	6.80	760 mmHg	305	Bruker AVANCE III 600
23	3D HNHB	0.40 mM [U-99% 13C; U-99% 15N] UVSSA, 0.48 mM TFIIH p62	90% H2O/10% D2O	20 mM	6.80	760 mmHg	305	Bruker AVANCE III 600
7	3D 1H-15N NOESY	0.40 mM [U-99% 13C; U-99% 15N] UVSSA, 0.48 mM TFIIH p62	90% H2O/10% D2O	20 mM	6.80	760 mmHg	305	Bruker AVANCE III 950
8	2D 1H-13C HSQC	0.40 mM [U-99% 13C; U-99% 15N] UVSSA, 0.48 mM TFIIH p62	100% D2O	20 mM	6.80	760 mmHg	305	Bruker AVANCE III 950
9	2D 1H-13C HSQC aromatic	0.40 mM [U-99% 13C; U-99% 15N] UVSSA, 0.48 mM TFIIH p62	100% D2O	20 mM	6.80	760 mmHg	305	Bruker AVANCE III 950
10	3D 1H-13C NOESY	0.40 mM [U-99% 13C; U-99% 15N] UVSSA, 0.48 mM TFIIH p62	100% D2O	20 mM	6.80	760 mmHg	305	Bruker AVANCE III 950
11	2D 1H-15N HSQC	0.40 mM [U-99% 13C; U-99% 15N] TFIIH p62, 0.48 mM UVSSA	90% H2O/10% D2O	20 mM	6.80	760 mmHg	305	Bruker AVANCE III 950
20	3D CBCA(CO)NH	0.40 mM [U-99% 13C; U-99% 15N] TFIIH p62, 0.48 mM UVSSA	90% H2O/10% D2O	20 mM	6.80	760 mmHg	305	Bruker AVANCE III 600
19	3D HNCO	0.40 mM [U-99% 13C; U-99% 15N] TFIIH p62, 0.48 mM UVSSA	90% H2O/10% D2O	20 mM	6.80	760 mmHg	305	Bruker AVANCE III 600
18	3D HBHA(CO)NH	0.40 mM [U-99% 13C; U-99% 15N] TFIIH p62, 0.48 mM UVSSA	90% H2O/10% D2O	20 mM	6.80	760 mmHg	305	Bruker AVANCE III 600
17	3D C(CO)NH	0.40 mM [U-99% 13C; U-99% 15N] TFIIH p62, 0.48 mM UVSSA	90% H2O/10% D2O	20 mM	6.80	760 mmHg	305	Bruker AVANCE III 600
16	3D H(CCO)NH	0.40 mM [U-99% 13C; U-99% 15N] TFIIH p62, 0.48 mM UVSSA	90% H2O/10% D2O	20 mM	6.80	760 mmHg	305	Bruker AVANCE III 600
21	3D HCCH-TOCSY	0.40 mM [U-99% 13C; U-99% 15N] TFIIH p62, 0.48 mM UVSSA	90% H2O/10% D2O	20 mM	6.80	760 mmHg	305	Bruker AVANCE III 600
22	3D HNHB	0.40 mM [U-99% 13C; U-99% 15N] TFIIH p62, 0.48 mM UVSSA	90% H2O/10% D2O	20 mM	6.80	760 mmHg	305	Bruker AVANCE III 600
15	3D 1H-15N NOESY	0.40 mM [U-99% 13C; U-99% 15N] TFIIH p62, 0.48 mM UVSSA	90% H2O/10% D2O	20 mM	6.80	760 mmHg	305	Bruker AVANCE III 950
14	2D 1H-13C HSQC	0.40 mM [U-99% 13C; U-99% 15N] TFIIH p62, 0.48 mM UVSSA	100% D2O	20 mM	6.80	760 mmHg	305	Bruker AVANCE III 950
13	2D 1H-13C HSQC aromatic	0.40 mM [U-99% 13C; U-99% 15N] TFIIH p62, 0.48 mM UVSSA	100% D2O	20 mM	6.80	760 mmHg	305	Bruker AVANCE III 950
12	3D 1H-13C NOESY	0.40 mM [U-99% 13C; U-99% 15N] TFIIH p62, 0.48 mM UVSSA	100% D2O	20 mM	6.80	760 mmHg	305	Bruker AVANCE III 950

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	AVANCE III	950
2	Bruker	AVANCE III	600

NMR Refinement
Method	Details	Software
DGSA-distance geometry simulated annealing		X-PLOR NIH

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	100
Conformers Submitted Total Number	20
Representative Model	1 (lowest energy)

Computation: NMR Software
#	Classification	Version	Software Name	Author
3	processing	NMRDraw		Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
1	chemical shift assignment	NMRView		Johnson, One Moon Scientific
5	structure calculation	X-PLOR NIH		Schwieters, Kuszewski, Tjandra and Clore
6	refinement	X-PLOR NIH		Schwieters, Kuszewski, Tjandra and Clore
2	data analysis	ProcheckNMR		Laskowski and MacArthur
4	data analysis	MOLMOL		Koradi, Billeter and Wuthrich