5XBO
Lanthanoid tagging via an unnatural amino acid for protein structure characterization
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-15N HSQC | 20mM HEPES, 100mM sodium chloride, 10% D2O, 0.2mM [U-99% 15N] ubiquitin | 90% H2O/10% D2O | 100 mM | 7.2 | 760 mmHg | 298 | Bruker AVANCE II 600 |
2 | 2D 1H-15N HSQC | 20mM HEPES, 100mM sodium chloride, 0.1mM [U-99% 15N] HHR23A UBA1 Domain, 0.1 mM ubiquitin | 90% H2O/10% D2O | 100 mM | 7.2 | 760 mmHg | 298 | Bruker AVANCE II 850 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE II | 600 |
2 | Bruker | AVANCE II | 850 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
simulated annealing | X-PLOR NIH |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 160 |
Conformers Submitted Total Number | 30 |
Representative Model | 1 (closest to the average) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | refinement | X-PLOR NIH | Schwieters, Kuszewski, Tjandra and Clore | |
3 | chemical shift assignment | CcpNMR | CCPN | |
4 | peak picking | CcpNMR | CCPN |