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Bruton's tyrosine kinase (BTK) with GDC-0853
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 6.5 300 PEG 5000 MME
ammonium sulfate
MES pH 6.5
Crystal Properties Matthews coefficient Solvent content 2.3 46.62
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 72.867 α = 90 b = 103.908 β = 90 c = 38.464 γ = 90
Symmetry Space Group P 21 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 110 PIXEL DECTRIS PILATUS 6M 2010-07-24 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SLS BEAMLINE X06SA 1.00004 SLS X06SA
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.59 60 100 0.069 21.2 7.8 40127 -3 14.6
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT 1.59 59.66 36493 3631 99.93 0.18867 0.18592 0.1936 0.21576 0.2225 RANDOM 13.999
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.15 -0.04 -0.11
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 31.369 r_dihedral_angle_4_deg 14.959 r_dihedral_angle_3_deg 11.868 r_long_range_B_refined 6.555 r_long_range_B_other 6.438 r_dihedral_angle_1_deg 6.334 r_scangle_other 5.066 r_scbond_other 4.22 r_scbond_it 4.212 r_angle_other_deg 3.677
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 31.369 r_dihedral_angle_4_deg 14.959 r_dihedral_angle_3_deg 11.868 r_long_range_B_refined 6.555 r_long_range_B_other 6.438 r_dihedral_angle_1_deg 6.334 r_scangle_other 5.066 r_scbond_other 4.22 r_scbond_it 4.212 r_angle_other_deg 3.677 r_mcangle_it 2.623 r_mcangle_other 2.623 r_mcbond_it 2.114 r_mcbond_other 2.111 r_angle_refined_deg 1.906 r_chiral_restr 0.105 r_gen_planes_other 0.017 r_bond_refined_d 0.016 r_gen_planes_refined 0.012 r_bond_other_d r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2214 Nucleic Acid Atoms Solvent Atoms 280 Heterogen Atoms 91
Software Software Software Name Purpose REFMAC refinement XDS data reduction XSCALE data scaling REFMAC phasing