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Cryo-EM structure of bovine multidrug resistance protein 1 (MRP1) bound to leukotriene C4
Refinement RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.425 r_long_range_B_refined 19.49 r_long_range_B_other 19.489 r_dihedral_angle_3_deg 13.122 r_scangle_other 12.359 r_dihedral_angle_4_deg 12.005 r_mcangle_it 11.7 r_mcangle_other 11.699 r_mcbond_it 7.231 r_mcbond_other 7.228
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.425 r_long_range_B_refined 19.49 r_long_range_B_other 19.489 r_dihedral_angle_3_deg 13.122 r_scangle_other 12.359 r_dihedral_angle_4_deg 12.005 r_mcangle_it 11.7 r_mcangle_other 11.699 r_mcbond_it 7.231 r_mcbond_other 7.228 r_scbond_it 6.959 r_scbond_other 6.957 r_dihedral_angle_1_deg 5.439 r_angle_other_deg 3.798 r_angle_refined_deg 1.051 r_chiral_restr 0.056 r_bond_refined_d 0.008 r_gen_planes_refined 0.004 r_gen_planes_other 0.003 r_bond_other_d r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Sample bovine multidrug resistance protein 1 (MRP1) complexed with leukotriene C4
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument FEI VITROBOT MARK IV Cryogen Name ETHANE Sample Vitrification Details
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 203732 Reported Resolution (Å) 3.34 Resolution Method FSC 0.143 CUT-OFF Other Details Refinement Type Symmetry Type POINT Point Symmetry C1
Map-Model Fitting and Refinement Id 1 Refinement Space RECIPROCAL Refinement Protocol AB INITIO MODEL Refinement Target Overall B Value Fitting Procedure Details
Data Acquisition Detector Type GATAN K2 SUMMIT (4k x 4k) Electron Dose (electrons/Å**2) 84
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model FEI TITAN KRIOS Minimum Defocus (nm) 700 Maximum Defocus (nm) 2400 Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS 2.7 Imaging Mode BRIGHT FIELD Specimen Holder Model FEI TITAN KRIOS AUTOGRID HOLDER Nominal Magnification 37000 Calibrated Magnification Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details
EM Software Task Software Package Version PARTICLE SELECTION RELION 1.4 IMAGE ACQUISITION SerialEM CTF CORRECTION CTFFIND4 MODEL FITTING Coot 0.8.7 INITIAL EULER ASSIGNMENT RELION 1.4 FINAL EULER ASSIGNMENT FREALIGN RECONSTRUCTION FREALIGN MODEL REFINEMENT PHENIX 1.11 MODEL REFINEMENT REFMAC CCP4 7.0
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details PHASE FLIPPING AND AMPLITUDE CORRECTION 203732