5U5S | pdb_00005u5s

Solution structures of Brd2 second bromodomain in complex with stat3 peptide


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D HNCACB10 mM sodium phosphate, 100 mM sodium chloride, 2 mM EDTA, 2 mM [U-2H] DTT90% H2O/10% D2Onull7.41 atm298Bruker AVANCE 600
23D HN(COCA)CB10 mM sodium phosphate, 100 mM sodium chloride, 2 mM EDTA, 2 mM [U-2H] DTT90% H2O/10% D2Onull7.41 atm298Bruker AVANCE 600
33D 1H-15N NOESY10 mM sodium phosphate, 100 mM sodium chloride, 2 mM EDTA, 2 mM [U-2H] DTT90% H2O/10% D2Onull7.41 atm298Bruker AVANCE 800
43D 1H-13C NOESY aliphatic10 mM sodium phosphate, 100 mM sodium chloride, 2 mM EDTA, 2 mM [U-2H] DTT100% D2Onull7.41 atm298Bruker AVANCE 900
53D 1H-13C NOESY aromatic10 mM sodium phosphate, 100 mM sodium chloride, 2 mM EDTA, 2 mM [U-2H] DTT100% D2Onull7.41 atm298Bruker AVANCE 900
63D 1H-13C filtered NOESY aliphatic10 mM sodium phosphate, 100 mM sodium chloride, 2 mM EDTA, 2 mM [U-2H] DTT100% D2Onull7.41 atm298Bruker AVANCE 800
73D 1H-13C filtered NOESY aromatic10 mM sodium phosphate, 100 mM sodium chloride, 2 mM EDTA, 2 mM [U-2H] DTT100% D2Onull7.41 atm298Bruker AVANCE 800
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE600
2BrukerAVANCE800
3BrukerAVANCE900
NMR Refinement
MethodDetailsSoftware
torsion angle dynamicsCNS
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number200
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementARIA2.3Linge, O'Donoghue and Nilges
2structure calculationCNSBrunger, Adams, Clore, Gros, Nilges and Read
3chemical shift assignmentNMRView5.04Johnson, One Moon Scientific
4peak pickingNMRView5.04Johnson, One Moon Scientific
5refinementTALOSCornilescu, Delaglio and Bax
6collectionTopSpinBruker Biospin
7processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
8data analysisProcheckNMRLaskowski and MacArthur