☰ Navigation Tabs
Cryo-EM structure of the human TAP ATP-Binding Cassette Transporter
Refinement RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 30.673 r_long_range_B_refined 21.131 r_long_range_B_other 21.13 r_mcangle_it 13.652 r_mcangle_other 13.651 r_dihedral_angle_3_deg 12.946 r_scangle_other 12.476 r_dihedral_angle_4_deg 10.55 r_scbond_it 8.345 r_scbond_other 8.344
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 30.673 r_long_range_B_refined 21.131 r_long_range_B_other 21.13 r_mcangle_it 13.652 r_mcangle_other 13.651 r_dihedral_angle_3_deg 12.946 r_scangle_other 12.476 r_dihedral_angle_4_deg 10.55 r_scbond_it 8.345 r_scbond_other 8.344 r_mcbond_it 7.984 r_mcbond_other 7.984 r_dihedral_angle_1_deg 4.46 r_angle_refined_deg 0.888 r_angle_other_deg 0.855 r_chiral_restr 0.04 r_bond_refined_d 0.007 r_gen_planes_refined 0.003 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Sample TAP ATP-Binding Cassette Transporter
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument FEI VITROBOT MARK IV Cryogen Name ETHANE Sample Vitrification Details
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 501973 Reported Resolution (Å) 3.97 Resolution Method FSC 0.143 CUT-OFF Other Details Refinement Type Symmetry Type POINT Point Symmetry C1
Map-Model Fitting and Refinement Id 1 Refinement Space RECIPROCAL Refinement Protocol OTHER Refinement Target R factor and FSC Overall B Value 150 Fitting Procedure Details
Data Acquisition Detector Type GATAN K2 SUMMIT (4k x 4k) Electron Dose (electrons/Å**2) 1.48
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model FEI TITAN KRIOS Minimum Defocus (nm) Maximum Defocus (nm) Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS 0.01 Imaging Mode BRIGHT FIELD Specimen Holder Model FEI TITAN KRIOS AUTOGRID HOLDER Nominal Magnification Calibrated Magnification Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details
EM Software Task Software Package Version PARTICLE SELECTION RELION IMAGE ACQUISITION SerialEM CTF CORRECTION CTFFIND4 MODEL FITTING Coot ccp4-7.0 RECONSTRUCTION FREALIGN 9.09 MODEL REFINEMENT REFMAC ccp4-7.0
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details NONE 501973