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Human METTL3-METTL14 complex
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 5IL0
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 8.5 293 23% PEG 4K, 0.2 M MgCl2, 0.1 M Tris pH8.5
Crystal Properties Matthews coefficient Solvent content 2.59 52.15
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 63.883 α = 90 b = 63.883 β = 90 c = 225.709 γ = 120
Symmetry Space Group P 32 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD RAYONIX MX-300 2015-01-29 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON CLSI BEAMLINE 08ID-1 0.97957 CLSI 08ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.8 50 99.9 0.117 8 7.7 50717
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.8 1.83 100 0.868 0.615 6.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 5IL0 1.8 50 49455 1180 99.89 0.1984 0.1977 0.2067 0.2241 0.2321 RANDOM 27.842
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.03 0.01 0.03 -0.09
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.36 r_dihedral_angle_4_deg 16.078 r_dihedral_angle_3_deg 12.819 r_dihedral_angle_1_deg 6.069 r_mcangle_it 2.742 r_mcbond_it 1.738 r_mcbond_other 1.738 r_angle_refined_deg 1.409 r_angle_other_deg 0.93 r_chiral_restr 0.081
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.36 r_dihedral_angle_4_deg 16.078 r_dihedral_angle_3_deg 12.819 r_dihedral_angle_1_deg 6.069 r_mcangle_it 2.742 r_mcbond_it 1.738 r_mcbond_other 1.738 r_angle_refined_deg 1.409 r_angle_other_deg 0.93 r_chiral_restr 0.081 r_bond_refined_d 0.01 r_gen_planes_refined 0.006 r_bond_other_d 0.002 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3531 Nucleic Acid Atoms Solvent Atoms 197 Heterogen Atoms 43
Software Software Software Name Purpose SCALEPACK data scaling REFMAC refinement PDB_EXTRACT data extraction PHASER phasing HKL-3000 data reduction