5OWJ
The dynamic dimer structure of the chaperone Trigger Factor (conformer 2)
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
3 | 2D [15N,1H]-TROSY | 1 mM [U-13C; U-15N; U-2H] Trigger Factor | 95% H2O/5% D2O | 100 mM | 6.5 | 1 atm | 298 | Bruker AvanceIII 900 |
2 | 3D TROSY-HNCACB | 1 mM [U-13C; U-15N; U-2H] Trigger Factor | 95% H2O/5% D2O | 100 mM | 6.5 | 1 atm | 298 | Bruker AvanceIII 900 |
1 | 2D [15N,1H]-TROSY | 0.3 mM [U-15N; U-2H] Trigger Factor | 95% H2O/5% D2O | 100 mM | 6.5 | 1 atm | 298 | Bruker Ascend 700 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | Ascend | 700 |
2 | Bruker | AvanceIII | 900 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
simulated annealing | Xplor-NIH |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 10 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | collection | TopSpin | Bruker Biospin | |
2 | processing | PROSA | Guntert | |
3 | data analysis | CARA | Keller and Wuthrich | |
4 | structure calculation | HADDOCK | Bonvin | |
5 | refinement | Xplor-NIH | Schwieters, Kuszewski, Tjandra and Clore | |
6 | chemical shift assignment | CARA | Keller and Wuthrich |