5OBZ

low resolution structure of the p34ct/p44ct minimal complex


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP293.1515% PEG 20,000 100 mM MES pH 6.5
Crystal Properties
Matthews coefficientSolvent content
3.2762.38

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 138.212α = 90
b = 138.212β = 90
c = 95.235γ = 120
Symmetry
Space GroupP 63 2 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMARMOSAIC 225 mm CCD2013-05-11MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONESRF BEAMLINE ID23-20.8726ESRFID23-2

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
13.745.299.90.29.58.16120

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT5NUS3.745.2582827899.840.198430.196160.24623RANDOM152.72
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
2.51.252.5-8.12
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg36.133
r_long_range_B_refined20.926
r_long_range_B_other20.925
r_dihedral_angle_3_deg17.339
r_mcangle_it16.157
r_mcangle_other16.156
r_scangle_other15.268
r_dihedral_angle_4_deg15.08
r_mcbond_it10.352
r_mcbond_other10.338
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg36.133
r_long_range_B_refined20.926
r_long_range_B_other20.925
r_dihedral_angle_3_deg17.339
r_mcangle_it16.157
r_mcangle_other16.156
r_scangle_other15.268
r_dihedral_angle_4_deg15.08
r_mcbond_it10.352
r_mcbond_other10.338
r_scbond_it9.755
r_scbond_other9.751
r_dihedral_angle_1_deg5.612
r_angle_refined_deg1.61
r_angle_other_deg1.107
r_chiral_restr0.109
r_bond_refined_d0.011
r_gen_planes_refined0.008
r_bond_other_d0.003
r_gen_planes_other0.002
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_scangle_it
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2079
Nucleic Acid Atoms
Solvent Atoms1
Heterogen Atoms2

Software

Software
Software NamePurpose
REFMACrefinement
XDSdata reduction
Aimlessdata scaling
PHASERphasing