☰ Navigation Tabs
Cellobiohydrolase Cel7A from T. atroviride
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 7 293 Precipitant:
5 mM NiCl2
0.1 M HEPES pH 7.0
20% w/v PEG 3350
Sample in 20 mM Bis-Tris buffer, pH 7.0
Mixing 1:1
Crystal Properties Matthews coefficient Solvent content 2.26 45.63
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 55.85 α = 90 b = 71.34 β = 89.99 c = 102.912 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 6M 2013-11-09 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID23-1 0.97243 ESRF ID23-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.75 58.63 83.5 0.087 8.8 2.8 81328
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.75 1.85 79.1 0.504 2.9
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT 1.75 58.63 63799 3413 82.64 0.1578 0.15606 0.1646 0.19015 0.1971 RANDOM 18.063
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.06 0.04 0.02
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.649 r_dihedral_angle_4_deg 19.643 r_dihedral_angle_3_deg 11.702 r_dihedral_angle_1_deg 6.392 r_angle_other_deg 3.989 r_long_range_B_refined 3.943 r_long_range_B_other 3.715 r_scangle_other 1.397 r_mcangle_other 1.36 r_mcangle_it 1.359
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.649 r_dihedral_angle_4_deg 19.643 r_dihedral_angle_3_deg 11.702 r_dihedral_angle_1_deg 6.392 r_angle_other_deg 3.989 r_long_range_B_refined 3.943 r_long_range_B_other 3.715 r_scangle_other 1.397 r_mcangle_other 1.36 r_mcangle_it 1.359 r_angle_refined_deg 1.353 r_scbond_it 0.857 r_scbond_other 0.856 r_mcbond_it 0.796 r_mcbond_other 0.792 r_chiral_restr 0.078 r_bond_refined_d 0.008 r_gen_planes_refined 0.005 r_gen_planes_other 0.005 r_bond_other_d r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 6344 Nucleic Acid Atoms Solvent Atoms 849 Heterogen Atoms 221
Software Software Software Name Purpose REFMAC refinement XDS data reduction SCALA data scaling PHASER phasing